Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TNFP01375 RNU4-91P-201ENST00000364778 135 ntBASIC1.21□□□□□ -2.22
TNFP01375 MIR499A-201ENST00000384903 122 ntBASIC1.21□□□□□ -2.22
TNFP01375 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFP01375 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFP01375 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFP01375 AC244505.5-201ENST00000443639 207 ntBASIC1.21□□□□□ -2.22
TNFP01375 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.21□□□□□ -2.22
TNFP01375 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFP01375 AL357134.1-201ENST00000445848 426 ntBASIC1.21□□□□□ -2.22
TNFP01375 FO393415.2-201ENST00000480085 343 ntBASIC1.21□□□□□ -2.22
TNFP01375 AC027575.1-201ENST00000481064 460 ntBASIC1.21□□□□□ -2.22
TNFP01375 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TNFP01375 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TNFP01375 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFP01375 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.21□□□□□ -2.22
TNFP01375 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFP01375 C1DP5-201ENST00000525775 383 ntBASIC1.21□□□□□ -2.22
TNFP01375 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.21□□□□□ -2.22
TNFP01375 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.21□□□□□ -2.22
TNFP01375 AL592148.2-201ENST00000612210 372 ntBASIC1.21□□□□□ -2.22
TNFP01375 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
TNFP01375 AC006338.1-201ENST00000618453 749 ntBASIC1.21□□□□□ -2.22
TNFP01375 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFP01375 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TNFP01375 MTND5P10-201ENST00000603719 1809 ntBASIC1.21□□□□□ -2.22
TNFP01375 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TNFP01375 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFP01375 AL589655.1-201ENST00000405398 482 ntBASIC1.2□□□□□ -2.22
TNFP01375 MIR1290-201ENST00000408735 78 ntBASIC1.2□□□□□ -2.22
TNFP01375 EDDM3CP-201ENST00000415977 425 ntBASIC1.2□□□□□ -2.22
TNFP01375 DDX3P2-201ENST00000446138 111 ntBASIC1.2□□□□□ -2.22
TNFP01375 HMGN2P18-201ENST00000450680 270 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.2□□□□□ -2.22
TNFP01375 RPS20P24-201ENST00000457473 361 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.2□□□□□ -2.22
TNFP01375 AC008834.1-201ENST00000511612 175 ntBASIC1.2□□□□□ -2.22
TNFP01375 RNU6-488P-201ENST00000515918 99 ntBASIC1.2□□□□□ -2.22
TNFP01375 RNU6-202P-201ENST00000515998 96 ntBASIC1.2□□□□□ -2.22
TNFP01375 RNU6-1095P-201ENST00000516148 108 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.2□□□□□ -2.22
TNFP01375 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC087465.1-201ENST00000560574 245 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFP01375 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFP01375 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFP01375 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFP01375 AC013553.2-201ENST00000604244 589 ntBASIC1.2□□□□□ -2.22
TNFP01375 AC068276.1-201ENST00000605793 379 ntBASIC1.2□□□□□ -2.22
TNFP01375 MIR7157-201ENST00000635801 60 ntBASIC1.2□□□□□ -2.22
TNFP01375 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TNFP01375 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TNFP01375 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TNFP01375 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TNFP01375 RNU6-730P-201ENST00000383954 104 ntBASIC1.19□□□□□ -2.22
TNFP01375 RNU6-1083P-201ENST00000384022 107 ntBASIC1.19□□□□□ -2.22
TNFP01375 UBE2V1P9-201ENST00000414760 368 ntBASIC1.19□□□□□ -2.22
TNFP01375 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.19□□□□□ -2.22
TNFP01375 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TNFP01375 AL512844.2-201ENST00000433990 593 ntBASIC1.19□□□□□ -2.22
TNFP01375 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.19□□□□□ -2.22
TNFP01375 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFP01375 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFP01375 AC093852.1-201ENST00000503587 266 ntBASIC1.19□□□□□ -2.22
TNFP01375 SCARNA3-201ENST00000517097 143 ntBASIC1.19□□□□□ -2.22
TNFP01375 MIR3921-201ENST00000577308 85 ntBASIC1.19□□□□□ -2.22
TNFP01375 AC097504.2-201ENST00000608088 454 ntBASIC1.19□□□□□ -2.22
TNFP01375 AC117490.2-201ENST00000610042 594 ntBASIC1.19□□□□□ -2.22
TNFP01375 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
TNFP01375 AP003400.5-201ENST00000624827 617 ntBASIC1.19□□□□□ -2.22
TNFP01375 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TNFP01375 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TNFP01375 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
TNFP01375 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TNFP01375 DEFB108F-201ENST00000344638 222 ntBASIC1.18□□□□□ -2.22
TNFP01375 MIR325-201ENST00000385260 98 ntBASIC1.18□□□□□ -2.22
TNFP01375 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
TNFP01375 AL356421.1-201ENST00000403255 413 ntBASIC1.18□□□□□ -2.22
TNFP01375 MIR1276-201ENST00000408707 83 ntBASIC1.18□□□□□ -2.22
TNFP01375 AC023141.4-201ENST00000412031 328 ntBASIC1.18□□□□□ -2.22
TNFP01375 AL136133.1-201ENST00000413694 376 ntBASIC1.18□□□□□ -2.22
TNFP01375 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
TNFP01375 AL035410.1-201ENST00000427409 427 ntBASIC1.18□□□□□ -2.22
TNFP01375 FO393414.1-201ENST00000428697 1184 ntBASIC1.18□□□□□ -2.22
TNFP01375 AC012497.1-201ENST00000429392 575 ntBASIC1.18□□□□□ -2.22
TNFP01375 AL592447.1-201ENST00000447592 540 ntBASIC1.18□□□□□ -2.22
TNFP01375 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.18□□□□□ -2.22
TNFP01375 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFP01375 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.18□□□□□ -2.22
TNFP01375 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFP01375 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFP01375 AC022616.2-201ENST00000523185 300 ntBASIC1.18□□□□□ -2.22
TNFP01375 DEFB108D-201ENST00000527787 222 ntBASIC1.18□□□□□ -2.22
TNFP01375 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.18□□□□□ -2.22
TNFP01375 AC084033.1-201ENST00000550830 633 ntBASIC1.18□□□□□ -2.22
TNFP01375 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.18□□□□□ -2.22
TNFP01375 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.18□□□□□ -2.22
TNFP01375 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TNFP01375 OR4G11P-202ENST00000642116 1414 ntBASIC1.17□□□□□ -2.22
TNFP01375 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms