Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 RPS6P12-201ENST00000432491 726 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC010095.1-201ENST00000443543 144 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 SNRPGP6-201ENST00000451124 220 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AP000926.1-201ENST00000479573 241 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 AP001646.1-201ENST00000527936 915 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC123904.3-201ENST00000547218 814 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC130324.3-201ENST00000614165 542 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC099506.2-201ENST00000623074 221 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 AL513302.2-201ENST00000562313 1842 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 RNU6-451P-201ENST00000362921 107 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC012498.1-201ENST00000424037 437 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC006989.1-201ENST00000427212 131 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 MTCO3P45-201ENST00000443036 613 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AL357552.1-201ENST00000445254 415 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC010469.1-201ENST00000463864 576 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 ARL2BPP2-201ENST00000550907 489 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.78□□□□□ -1.64
RAPGEF3O95398 BNIP3P30-201ENST00000601184 574 ntBASIC4.78□□□□□ -1.64
RAPGEF3O95398 AC006020.1-201ENST00000420179 1854 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAPGEF3O95398 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 EXOC5P1-201ENST00000510543 1969 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 RNU6-960P-201ENST00000364056 120 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAPGEF3O95398 RNU6-373P-201ENST00000411247 98 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC244098.2-201ENST00000422068 99 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 USP12PX-201ENST00000432383 1057 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL121601.2-201ENST00000438019 707 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC004866.2-201ENST00000438285 481 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 ELOCP23-201ENST00000452014 332 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 SNRPGP5-201ENST00000456003 220 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL163973.1-201ENST00000484753 577 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC116562.3-201ENST00000506136 177 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 PCBP2P3-201ENST00000509726 843 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 SNORD60.2-201ENST00000516883 86 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC068587.5-201ENST00000528506 175 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL121992.2-201ENST00000606262 256 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AL354950.2-201ENST00000617939 290 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 AC024940.5-201ENST00000622889 474 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 MIR622-201ENST00000638396 96 ntBASIC4.77□□□□□ -1.65
RAPGEF3O95398 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAPGEF3O95398 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RAPGEF3O95398 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAPGEF3O95398 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAPGEF3O95398 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 Y_RNA.255-201ENST00000364581 97 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 Y_RNA.381-201ENST00000365666 102 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 RNU6-641P-201ENST00000384006 107 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 RNU2-36P-201ENST00000410361 191 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 RNA5SP293-201ENST00000410527 113 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAPGEF3O95398 ZNF863P-201ENST00000426746 417 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 MYL8P-204ENST00000431574 518 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC090774.1-201ENST00000435925 246 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC008264.1-201ENST00000447612 367 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 RNU7-182P-201ENST00000459009 62 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 GMFBP1-201ENST00000467831 427 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC078785.3-201ENST00000476607 425 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC008549.1-201ENST00000512900 643 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 HIF1AP1-201ENST00000553642 175 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.76□□□□□ -1.65
RAPGEF3O95398 CYCSP39-201ENST00000565821 309 ntBASIC4.76□□□□□ -1.65
RAPGEF3O95398 AC091135.1-201ENST00000585943 307 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms