Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 Y_RNA.608-201ENST00000410647 95 ntBASIC2.93□□□□□ -1.94
SIX3O95343 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX3O95343 AL353678.1-201ENST00000422735 741 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX3O95343 AL358075.3-201ENST00000426289 226 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AL356583.2-201ENST00000426536 280 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC009414.1-201ENST00000427200 443 ntBASIC2.93□□□□□ -1.94
SIX3O95343 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX3O95343 AC244505.4-201ENST00000434905 287 ntBASIC2.93□□□□□ -1.94
SIX3O95343 RPS15AP5-201ENST00000436276 388 ntBASIC2.93□□□□□ -1.94
SIX3O95343 SSXP5-201ENST00000443473 287 ntBASIC2.93□□□□□ -1.94
SIX3O95343 COX6CP12-201ENST00000446748 202 ntBASIC2.93□□□□□ -1.94
SIX3O95343 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX3O95343 FDX1P2-201ENST00000450769 375 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC128713.1-201ENST00000471495 306 ntBASIC2.93□□□□□ -1.94
SIX3O95343 RPS3AP43-201ENST00000479743 781 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX3O95343 AC132942.1-201ENST00000486753 483 ntBASIC2.93□□□□□ -1.94
SIX3O95343 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX3O95343 MTCO1P47-201ENST00000523889 1271 ntBASIC2.93□□□□□ -1.94
SIX3O95343 SUB1P1-201ENST00000524415 382 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC087373.1-201ENST00000524920 491 ntBASIC2.93□□□□□ -1.94
SIX3O95343 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX3O95343 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX3O95343 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX3O95343 AC020895.1-201ENST00000595362 272 ntBASIC2.93□□□□□ -1.94
SIX3O95343 BNIP3P9-201ENST00000603714 553 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC112191.3-201ENST00000604371 277 ntBASIC2.93□□□□□ -1.94
SIX3O95343 MIR7106-201ENST00000612419 65 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AC011939.3-201ENST00000613686 466 ntBASIC2.93□□□□□ -1.94
SIX3O95343 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX3O95343 AC009878.1-201ENST00000621819 340 ntBASIC2.93□□□□□ -1.94
SIX3O95343 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 FAM35CP-201ENST00000554755 2470 ntBASIC2.93□□□□□ -1.94
SIX3O95343 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SIX3O95343 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
SIX3O95343 SNORA5B-201ENST00000363786 132 ntBASIC2.92□□□□□ -1.94
SIX3O95343 RNY1P12-201ENST00000364251 105 ntBASIC2.92□□□□□ -1.94
SIX3O95343 SNORD115.1-201ENST00000391109 76 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AL445529.1-201ENST00000398713 389 ntBASIC2.92□□□□□ -1.94
SIX3O95343 Y_RNA.598-201ENST00000410480 95 ntBASIC2.92□□□□□ -1.94
SIX3O95343 RNU2-49P-201ENST00000410666 184 ntBASIC2.92□□□□□ -1.94
SIX3O95343 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX3O95343 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 SEPT2P1-201ENST00000419651 180 ntBASIC2.92□□□□□ -1.94
SIX3O95343 ELOCP4-201ENST00000420090 333 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
SIX3O95343 S100A11P2-201ENST00000467589 312 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC011825.1-201ENST00000484967 388 ntBASIC2.92□□□□□ -1.94
SIX3O95343 RN7SL504P-201ENST00000494496 287 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 RNU7-51P-201ENST00000516560 62 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.92□□□□□ -1.94
SIX3O95343 AC022634.1-201ENST00000520765 532 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AP006587.4-201ENST00000526053 529 ntBASIC2.92□□□□□ -1.94
SIX3O95343 DUXAP5-201ENST00000529668 529 ntBASIC2.92□□□□□ -1.94
SIX3O95343 ARL2BPP2-201ENST00000550907 489 ntBASIC2.92□□□□□ -1.94
SIX3O95343 MRPS36P5-201ENST00000551909 298 ntBASIC2.92□□□□□ -1.94
SIX3O95343 NACAP3-201ENST00000552100 481 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX3O95343 AC109446.2-201ENST00000567872 497 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX3O95343 MIR3915-201ENST00000578518 97 ntBASIC2.92□□□□□ -1.94
SIX3O95343 MIR3118-1-201ENST00000581787 76 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AC007619.2-201ENST00000605743 379 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AL031775.1-201ENST00000607014 887 ntBASIC2.92□□□□□ -1.94
SIX3O95343 MIR7843-201ENST00000622274 79 ntBASIC2.92□□□□□ -1.94
SIX3O95343 AP003485.2-201ENST00000623636 610 ntBASIC2.92□□□□□ -1.94
SIX3O95343 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX3O95343 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX3O95343 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
SIX3O95343 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX3O95343 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX3O95343 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX3O95343 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX3O95343 RNU2-8P-201ENST00000410727 190 ntBASIC2.91□□□□□ -1.94
SIX3O95343 ZNF90P2-204ENST00000419323 1075 ntBASIC2.91□□□□□ -1.94
SIX3O95343 MTND2P18-201ENST00000419962 1030 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
SIX3O95343 GTF2IP20-201ENST00000431663 360 ntBASIC2.91□□□□□ -1.94
SIX3O95343 RPL7P34-201ENST00000433316 712 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX3O95343 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
SIX3O95343 FABP5P13-201ENST00000452144 328 ntBASIC2.91□□□□□ -1.94
SIX3O95343 SNRPFP4-201ENST00000456366 242 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC093899.1-201ENST00000457984 376 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC117440.1-201ENST00000474107 571 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC010587.1-201ENST00000505809 469 ntBASIC2.91□□□□□ -1.94
SIX3O95343 MRPS36P2-201ENST00000512569 299 ntBASIC2.91□□□□□ -1.94
SIX3O95343 RNU6-677P-201ENST00000516914 101 ntBASIC2.91□□□□□ -1.94
SIX3O95343 SNORA31.26-201ENST00000517250 137 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC022878.1-201ENST00000530684 149 ntBASIC2.91□□□□□ -1.94
SIX3O95343 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX3O95343 MIR548AB-201ENST00000584917 84 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms