Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MTCO2P27-201ENST00000420740 428 ntBASIC3.81□□□□□ -1.8
PROM1O43490 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
PROM1O43490 AC004866.2-201ENST00000438285 481 ntBASIC3.81□□□□□ -1.8
PROM1O43490 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.81□□□□□ -1.8
PROM1O43490 RNU6-1095P-201ENST00000516148 108 ntBASIC3.81□□□□□ -1.8
PROM1O43490 RNU6-864P-201ENST00000516256 108 ntBASIC3.81□□□□□ -1.8
PROM1O43490 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.81□□□□□ -1.8
PROM1O43490 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.81□□□□□ -1.8
PROM1O43490 AC106782.4-201ENST00000568264 210 ntBASIC3.81□□□□□ -1.8
PROM1O43490 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
PROM1O43490 MIR3942-201ENST00000585264 109 ntBASIC3.81□□□□□ -1.8
PROM1O43490 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
PROM1O43490 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 MIR6130-201ENST00000619419 109 ntBASIC3.81□□□□□ -1.8
PROM1O43490 AC090971.5-201ENST00000621102 293 ntBASIC3.81□□□□□ -1.8
PROM1O43490 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PROM1O43490 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PROM1O43490 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PROM1O43490 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.81□□□□□ -1.8
PROM1O43490 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
PROM1O43490 MTND4P27-201ENST00000450813 1354 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
PROM1O43490 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.8□□□□□ -1.8
PROM1O43490 Y_RNA.315-201ENST00000365117 102 ntBASIC3.8□□□□□ -1.8
PROM1O43490 SNORA23-201ENST00000365128 182 ntBASIC3.8□□□□□ -1.8
PROM1O43490 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PROM1O43490 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 RNU6-1297P-201ENST00000384415 104 ntBASIC3.8□□□□□ -1.8
PROM1O43490 Y_RNA.579-201ENST00000390939 94 ntBASIC3.8□□□□□ -1.8
PROM1O43490 NDUFS5P1-201ENST00000405668 289 ntBASIC3.8□□□□□ -1.8
PROM1O43490 MIR1251-201ENST00000408552 70 ntBASIC3.8□□□□□ -1.8
PROM1O43490 RNA5SP111-201ENST00000411386 101 ntBASIC3.8□□□□□ -1.8
PROM1O43490 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.8□□□□□ -1.8
PROM1O43490 RPS7P15-201ENST00000415804 584 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AL356095.1-201ENST00000417217 199 ntBASIC3.8□□□□□ -1.8
PROM1O43490 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
PROM1O43490 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 AL121871.1-201ENST00000443413 436 ntBASIC3.8□□□□□ -1.8
PROM1O43490 HMGN2P16-201ENST00000456802 261 ntBASIC3.8□□□□□ -1.8
PROM1O43490 Y_RNA.635-201ENST00000459041 101 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.8□□□□□ -1.8
PROM1O43490 MTCO1P29-201ENST00000496868 288 ntBASIC3.8□□□□□ -1.8
PROM1O43490 UBE2CP3-201ENST00000502715 450 ntBASIC3.8□□□□□ -1.8
PROM1O43490 RN7SKP13-201ENST00000515933 244 ntBASIC3.8□□□□□ -1.8
PROM1O43490 SNORA31.20-201ENST00000517111 133 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.8□□□□□ -1.8
PROM1O43490 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 AC093012.1-202ENST00000549403 582 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AC093249.1-201ENST00000567049 203 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.8□□□□□ -1.8
PROM1O43490 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.8□□□□□ -1.8
PROM1O43490 BNIP3P25-201ENST00000596023 559 ntBASIC3.8□□□□□ -1.8
PROM1O43490 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.8□□□□□ -1.8
PROM1O43490 MIR6867-201ENST00000610636 67 ntBASIC3.8□□□□□ -1.8
PROM1O43490 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
PROM1O43490 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.8□□□□□ -1.8
PROM1O43490 MTND4LP32-201ENST00000636111 270 ntBASIC3.8□□□□□ -1.8
PROM1O43490 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PROM1O43490 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PROM1O43490 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PROM1O43490 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PROM1O43490 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PROM1O43490 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PROM1O43490 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.8□□□□□ -1.8
PROM1O43490 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PROM1O43490 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PROM1O43490 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PROM1O43490 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PROM1O43490 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RNU6-1155P-201ENST00000363554 107 ntBASIC3.79□□□□□ -1.8
PROM1O43490 Y_RNA.301-201ENST00000364990 103 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RNA5SP235-201ENST00000365411 114 ntBASIC3.79□□□□□ -1.8
PROM1O43490 MIR548F5-201ENST00000408421 86 ntBASIC3.79□□□□□ -1.8
PROM1O43490 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
PROM1O43490 RHEBP3-201ENST00000411920 351 ntBASIC3.79□□□□□ -1.8
PROM1O43490 CALM2P2-201ENST00000428512 440 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.79□□□□□ -1.8
PROM1O43490 ATP5HP2-201ENST00000433885 485 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC005019.1-201ENST00000436455 431 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.79□□□□□ -1.8
PROM1O43490 MTCYBP6-201ENST00000441810 138 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC020550.1-201ENST00000447385 163 ntBASIC3.79□□□□□ -1.8
PROM1O43490 GAPDHP27-201ENST00000447427 1020 ntBASIC3.79□□□□□ -1.8
PROM1O43490 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.79□□□□□ -1.8
PROM1O43490 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.79□□□□□ -1.8
PROM1O43490 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
PROM1O43490 AC107399.1-201ENST00000451226 265 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms