Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGB3O15347 MIR4666A-201ENST00000580160 79 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 NRBF2P1-201ENST00000587407 859 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AL390838.2-201ENST00000602394 274 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 SEPT7P9-203ENST00000604116 343 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AL158211.4-201ENST00000606988 584 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.15-201ENST00000611544 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 uc_338.5-201ENST00000611839 155 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.16-201ENST00000613119 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.12-201ENST00000613778 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.20-201ENST00000613956 192 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.9-201ENST00000615427 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.11-201ENST00000616345 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.2-201ENST00000616535 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.3-201ENST00000617785 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.19-201ENST00000618602 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 RNU2-1-201ENST00000618664 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.6-201ENST00000619225 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.5-201ENST00000619465 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 U2.10-201ENST00000620268 191 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 AC002550.2-201ENST00000621246 394 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 MKKS-204ENST00000639674 192 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 LINC02211-204ENST00000642024 1070 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGB3O15347 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.4□□□□□ -2.19
HMGB3O15347 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMGB3O15347 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGB3O15347 RNU6-353P-201ENST00000364266 108 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMGB3O15347 CCNG1P1-201ENST00000406783 885 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 MTATP6P27-201ENST00000416987 621 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGB3O15347 AL451062.2-201ENST00000427515 271 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGB3O15347 AL445646.1-201ENST00000431784 216 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AC026410.2-201ENST00000460281 156 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AC005410.1-202ENST00000460347 485 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AP001486.1-201ENST00000463339 476 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGB3O15347 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGB3O15347 AC007182.2-201ENST00000489251 402 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.39□□□□□ -2.19
HMGB3O15347 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.39□□□□□ -2.19
HMGB3O15347 AC009097.3-201ENST00000563557 1018 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AL031274.2-201ENST00000599419 203 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGB3O15347 AC091152.3-201ENST00000604227 325 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 AC005000.2-201ENST00000605468 310 ntBASIC1.39□□□□□ -2.19
HMGB3O15347 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGB3O15347 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGB3O15347 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HMGB3O15347 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMGB3O15347 RNU1-72P-201ENST00000362976 153 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGB3O15347 SNRPEP9-201ENST00000436794 238 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 USP9YP15-201ENST00000442391 422 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 MTND6P13-201ENST00000443510 523 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGB3O15347 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 AC140059.1-201ENST00000489238 361 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 GNAI2P1-201ENST00000541815 315 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGB3O15347 AC021739.1-201ENST00000559631 174 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 RN7SL622P-201ENST00000585292 275 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AC011451.2-201ENST00000604303 598 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AP003973.1-201ENST00000604639 691 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AL450270.1-201ENST00000606160 391 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 AL138478.1-201ENST00000612252 832 ntBASIC1.38□□□□□ -2.19
HMGB3O15347 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB3O15347 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMGB3O15347 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMGB3O15347 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGB3O15347 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMGB3O15347 RNU6-1066P-201ENST00000363573 105 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 Y_RNA.548-201ENST00000384656 105 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 MIR518A2-201ENST00000384966 87 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 MIR506-201ENST00000384998 124 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 VN1R36P-201ENST00000414936 291 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AL451054.2-201ENST00000420896 202 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AL691517.1-201ENST00000440833 1235 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 MOB1AP2-201ENST00000446060 614 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC244505.3-201ENST00000454598 187 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC027575.1-201ENST00000481064 460 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AL160314.1-201ENST00000490836 438 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 RPL9P6-201ENST00000492764 598 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC104685.1-201ENST00000502445 371 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 HMGB1P35-201ENST00000503360 598 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC098862.1-201ENST00000504991 413 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC008834.1-201ENST00000511612 175 ntBASIC1.37□□□□□ -2.19
HMGB3O15347 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGB3O15347 AC022254.1-201ENST00000567857 235 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms