Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL136363.1-201ENST00000605349 337 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC121334.2-201ENST00000605387 271 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC105129.3-201ENST00000605455 485 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC093732.2-201ENST00000607950 274 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC009159.1-201ENST00000618386 642 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC007494.3-201ENST00000624660 743 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDLIM1O00151 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 AC008669.1-201ENST00000565823 2178 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 RNU6-1035P-201ENST00000384477 107 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 SNORA44-201ENST00000384584 132 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL512633.1-201ENST00000399931 655 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 RNU6-193P-201ENST00000410977 107 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM1O00151 ELOCP17-201ENST00000414751 326 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM1O00151 USP9YP26-201ENST00000421008 661 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 RPL35AP12-201ENST00000425362 338 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 MED14P1-201ENST00000430517 648 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 AC005094.1-201ENST00000440420 368 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 BMI1P1-201ENST00000445879 941 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL590365.1-201ENST00000450788 243 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 KATNBL1P6-201ENST00000453433 915 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM1O00151 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.63□□□□□ -1.99
PDLIM1O00151 MTND5P13-201ENST00000513046 1079 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 RNU6-201P-201ENST00000517100 61 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AC009812.2-201ENST00000517657 457 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.63□□□□□ -1.99
PDLIM1O00151 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 MTCO1P47-201ENST00000523889 1271 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 SUB1P1-201ENST00000524415 382 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 ATP5F1P5-201ENST00000526403 760 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 TRAV28-201ENST00000557548 323 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.63□□□□□ -1.99
PDLIM1O00151 ROCK1P1-201ENST00000573767 549 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 MIR3146-201ENST00000580367 79 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.63□□□□□ -1.99
PDLIM1O00151 ATP5A1P2-202ENST00000616464 443 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 AP003485.2-201ENST00000623636 610 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 ZNF519P1-201ENST00000449011 1626 ntBASIC2.63□□□□□ -1.99
PDLIM1O00151 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM1O00151 RNU6-270P-201ENST00000364131 105 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 RNY3P13-201ENST00000365542 102 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 RNU6-851P-201ENST00000384565 107 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 MIR767-201ENST00000390228 109 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AL049545.1-201ENST00000401856 572 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 RNU2-62P-201ENST00000410868 191 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AC096664.2-201ENST00000411843 406 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 Z99497.1-201ENST00000421282 135 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.62□□□□□ -1.99
PDLIM1O00151 AC244035.1-201ENST00000430042 390 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.62□□□□□ -1.99
PDLIM1O00151 Z82210.1-201ENST00000440037 231 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.62□□□□□ -1.99
PDLIM1O00151 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
PDLIM1O00151 NANOGNBP1-201ENST00000448444 480 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 EPS15P1-201ENST00000448836 336 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 RPS20P22-201ENST00000473700 357 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AC090888.1-201ENST00000561335 1141 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AMZ2P1-203ENST00000565833 850 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM1O00151 DPPA3P3-201ENST00000603842 430 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AL391813.2-201ENST00000609113 322 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 AC091931.1-201ENST00000623488 728 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 MTND1P37-201ENST00000636562 264 ntBASIC2.62□□□□□ -1.99
PDLIM1O00151 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.62□□□□□ -1.99
PDLIM1O00151 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM1O00151 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM1O00151 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PDLIM1O00151 AC000403.1-201ENST00000613696 3585 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PDLIM1O00151 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AF228730.1-201ENST00000397972 663 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 UBA52P6-201ENST00000399822 382 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDLIM1O00151 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms