Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RNU6-39P-201ENST00000384344 107 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 SNORA40C-201ENST00000391285 128 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 MRPL42P2-201ENST00000403169 426 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 NUP35P1-201ENST00000422734 947 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC114755.5-201ENST00000447760 831 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AP000797.1-201ENST00000478870 387 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC068781.1-201ENST00000488231 618 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RPL22P13-201ENST00000493291 347 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC231760.1-201ENST00000498002 260 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 IGKV2-26-201ENST00000518305 343 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RN7SL753P-201ENST00000581238 290 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC083760.1-201ENST00000589621 670 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL353778.1-201ENST00000603149 408 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RNU6-87P-201ENST00000607561 108 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC126118.1-201ENST00000607744 628 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AL449363.1-201ENST00000617815 186 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 AC024940.5-201ENST00000622889 474 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 TEX21P-201ENST00000447107 1476 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB1P1B2RPK0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 RNU6-166P-201ENST00000384371 107 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 RNU6-748P-201ENST00000384648 107 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 SNORD115.1-201ENST00000391109 76 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 U6atac.2-201ENST00000408644 118 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC114491.1-201ENST00000416095 246 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC097463.2-201ENST00000421074 142 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 EIF4EP4-201ENST00000424916 578 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AL589872.1-201ENST00000426602 288 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 ATP5JP1-201ENST00000431631 322 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 GSTA11P-201ENST00000452866 669 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AL583843.1-201ENST00000456070 346 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 RNU7-125P-201ENST00000458760 62 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC080013.2-201ENST00000460866 323 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 ACTR3P3-201ENST00000480448 893 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 RNU6-826P-201ENST00000516827 104 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC103843.2-201ENST00000530523 682 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AP003122.4-201ENST00000530980 758 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 ZNF321P-202ENST00000550843 495 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 MIR1273C-201ENST00000578669 77 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 MIR4284-201ENST00000578924 81 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 HMGN1P30-201ENST00000589286 268 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AL359999.1-201ENST00000604513 294 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AP002360.4-201ENST00000606980 481 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 uc_338.25-201ENST00000613756 156 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 MLECP1-201ENST00000615893 709 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 AC131159.1-201ENST00000621854 213 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 MIR6733-201ENST00000635723 61 ntBASIC3.18□□□□□ -1.9
HMGB1P1B2RPK0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 RNU5E-5P-201ENST00000365379 116 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 SNORA75B-201ENST00000384053 137 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AL451074.5-201ENST00000415894 435 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AC016831.2-201ENST00000417179 352 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AC009518.2-201ENST00000418056 731 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AL356583.2-201ENST00000426536 280 ntBASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGB1P1B2RPK0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms