Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC092427.1-201ENST00000439177 601 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RPS15AP7-201ENST00000439294 405 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 VN1R10P-201ENST00000447106 875 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 NDUFA5P7-201ENST00000452914 242 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RPL21P39-201ENST00000463605 483 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC104164.3-201ENST00000467363 1258 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC010285.1-201ENST00000470580 392 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 HMGN2P13-201ENST00000476476 274 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RPL21P93-201ENST00000480465 489 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC233702.1-201ENST00000482905 502 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC093591.1-201ENST00000491435 481 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC084024.2-201ENST00000503480 791 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 SNORD59.2-201ENST00000516873 68 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 SCARNA1-201ENST00000517138 166 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 HSPE1P20-201ENST00000538133 289 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC093519.1-201ENST00000566109 298 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MIR3935-201ENST00000583472 104 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 YWHAQP7-201ENST00000603536 658 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL445435.1-201ENST00000604232 665 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC013468.1-201ENST00000608680 598 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL590099.1-201ENST00000615276 138 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC245884.12-201ENST00000615364 59 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
COL6A6A6NMZ7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU6-37P-201ENST00000362692 107 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU6-11P-201ENST00000364234 107 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 MIR649-201ENST00000384843 97 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 MTCO2P1-201ENST00000424648 477 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC024082.2-201ENST00000434771 238 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC114801.2-201ENST00000503825 781 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC114322.1-201ENST00000506771 926 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 MTCO3P44-201ENST00000510977 541 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC010625.1-201ENST00000511296 403 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LSM6P2-201ENST00000552208 177 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL121821.2-201ENST00000556081 394 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC090616.5-202ENST00000582111 297 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 SNORD39.3-201ENST00000584451 71 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 DUXAP4-201ENST00000603046 613 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC009220.3-201ENST00000604318 586 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 DPRXP5-201ENST00000604662 539 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 SNHG22-203ENST00000617833 660 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL512506.2-201ENST00000624472 458 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC010608.3-201ENST00000625048 527 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 HSPE1P11-201ENST00000339579 310 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 SNORA51.2-201ENST00000364595 132 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 MIR144-201ENST00000384886 86 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL355615.1-201ENST00000406187 641 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU6-516P-201ENST00000411381 104 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC092634.6-201ENST00000418558 192 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RPL21P32-201ENST00000419877 477 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC114973.1-201ENST00000429057 632 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC092393.1-201ENST00000439625 742 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC004865.1-201ENST00000442276 1003 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL353691.1-201ENST00000451332 387 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 OFD1P3Y-201ENST00000453312 783 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC009901.1-201ENST00000506703 541 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC112206.4-201ENST00000515142 405 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 RNU5A-7P-201ENST00000515979 116 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC104417.1-201ENST00000523974 751 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 DUXAP5-201ENST00000529668 529 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC104072.1-201ENST00000568817 668 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 MIR3690-201ENST00000580266 75 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 BBIP1P1-201ENST00000602999 279 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC025588.3-201ENST00000604182 274 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 AC132825.7-201ENST00000638744 335 ntBASIC1.27□□□□□ -2.21
COL6A6A6NMZ7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RNU6-216P-201ENST00000363282 104 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 Y_RNA.311-201ENST00000365068 96 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms