Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.56□□□□□ -2.32
XIRP2A4UGR9 AC010735.1-201ENST00000567305 1026 ntBASIC0.56□□□□□ -2.32
XIRP2A4UGR9 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
XIRP2A4UGR9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
XIRP2A4UGR9 SNORD95.1-201ENST00000364099 68 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.55□□□□□ -2.32
XIRP2A4UGR9 HAUS6P2-201ENST00000433254 2404 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AL158823.1-201ENST00000418441 478 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AC105252.1-201ENST00000503089 286 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 SUB1P1-201ENST00000524415 382 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AL138976.2-201ENST00000563989 694 ntBASIC0.55□□□□□ -2.32
XIRP2A4UGR9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC244453.4-201ENST00000419150 388 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC246680.2-201ENST00000422106 389 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 TRBVB-201ENST00000477100 408 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 MIR4474-201ENST00000579189 78 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC024060.1-201ENST00000607052 494 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AL355802.3-201ENST00000607571 545 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 RNU6-30P-201ENST00000384561 107 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 RN7SKP61-201ENST00000410642 295 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 SNORD56-201ENST00000413522 71 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC079597.1-201ENST00000624306 508 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 RNU4-67P-201ENST00000364569 141 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC084757.1-201ENST00000559987 490 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 LINC00557-201ENST00000563184 1279 ntBASIC0.54□□□□□ -2.32
XIRP2A4UGR9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.54□□□□□ -2.32
XIRP2A4UGR9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AL356379.1-201ENST00000414105 126 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AC073614.1-201ENST00000438690 650 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AL161788.1-201ENST00000441805 169 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 RNU1-98P-201ENST00000458992 160 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AP001486.3-201ENST00000615334 372 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.53□□□□□ -2.32
XIRP2A4UGR9 SDAD1P3-201ENST00000427380 333 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.53□□□□□ -2.32
XIRP2A4UGR9 AC106052.1-201ENST00000608029 497 ntBASIC0.53□□□□□ -2.32
XIRP2A4UGR9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
XIRP2A4UGR9 Y_RNA.132-201ENST00000363421 102 ntBASIC0.53□□□□□ -2.33
XIRP2A4UGR9 RNY3-201ENST00000365484 102 ntBASIC0.53□□□□□ -2.33
XIRP2A4UGR9 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.53□□□□□ -2.33
XIRP2A4UGR9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.53□□□□□ -2.33
XIRP2A4UGR9 PMCHL2-203ENST00000457791 237 ntBASIC0.53□□□□□ -2.33
XIRP2A4UGR9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.53□□□□□ -2.33
XIRP2A4UGR9 AC010285.1-201ENST00000470580 392 ntBASIC0.53□□□□□ -2.33
XIRP2A4UGR9 HMGB3P17-201ENST00000504195 649 ntBASIC0.53□□□□□ -2.33
XIRP2A4UGR9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.53□□□□□ -2.33
XIRP2A4UGR9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.53□□□□□ -2.33
XIRP2A4UGR9 AC008555.8-201ENST00000623602 2168 ntBASIC0.52□□□□□ -2.33
XIRP2A4UGR9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
XIRP2A4UGR9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
XIRP2A4UGR9 MTCO1P3-201ENST00000429327 192 ntBASIC0.52□□□□□ -2.33
XIRP2A4UGR9 SNRPEP7-201ENST00000438350 220 ntBASIC0.52□□□□□ -2.33
XIRP2A4UGR9 AC009974.1-201ENST00000608881 455 ntBASIC0.52□□□□□ -2.33
XIRP2A4UGR9 AL157700.1-201ENST00000561973 1432 ntBASIC0.52□□□□□ -2.33
XIRP2A4UGR9 SFR1P1-201ENST00000403720 688 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC006461.1-201ENST00000412637 326 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RNA5SP471-201ENST00000516971 106 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC068620.3-201ENST00000602749 560 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC135178.6-201ENST00000605314 398 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC109809.1-201ENST00000619665 545 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AL136313.1-201ENST00000624804 202 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AL022578.1-201ENST00000439330 1433 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC011155.1-201ENST00000316512 456 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RNU6-1305P-201ENST00000364353 104 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RNU6-1181P-201ENST00000384191 106 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 MIR146A-201ENST00000385201 99 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 SNORA46.1-201ENST00000391069 153 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RFESDP1-201ENST00000422350 461 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RPS26P56-201ENST00000444468 240 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 MTND4LP3-201ENST00000468320 276 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC090425.2-201ENST00000608818 501 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC009090.3-201ENST00000616553 565 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RNU6-185P-201ENST00000384421 107 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 MIR518A2-201ENST00000384966 87 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 CCNB2P1-201ENST00000399411 1150 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AP000567.1-201ENST00000406413 156 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 OR9R1P-201ENST00000412200 877 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 RPL31P60-201ENST00000478450 367 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC103851.1-201ENST00000506833 274 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC118282.2-201ENST00000508739 374 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC245884.12-201ENST00000615364 59 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 AC240442.1-201ENST00000616055 283 ntBASIC0.51□□□□□ -2.33
XIRP2A4UGR9 SNORA16B-201ENST00000364674 135 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms