Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP000857.1-201ENST00000532151 543 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC004024.1-201ENST00000549244 247 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 MIR3200-201ENST00000580767 85 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC007014.2-201ENST00000615581 479 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC068831.7-201ENST00000616954 363 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC018692.3-201ENST00000623929 123 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC091903.1-201ENST00000624322 454 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 ZNF807-201ENST00000328088 1707 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.86
SNX9Q9Y5X1 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.256-201ENST00000364594 104 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.409-201ENST00000383990 98 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 Y_RNA.450-201ENST00000384198 113 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 SNORD115-47-201ENST00000391226 86 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 BTF3P7-201ENST00000407097 488 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 FCF1P1-201ENST00000432690 571 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC002486.1-201ENST00000435098 391 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 RPS15AP9-201ENST00000439856 381 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 MTCO2P3-201ENST00000442543 421 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 ELOCP23-201ENST00000452014 332 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 MTCO3P38-201ENST00000468910 766 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC007182.2-201ENST00000489251 402 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 SNORA31.8-201ENST00000516327 108 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 DEFB108D-201ENST00000527787 222 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC092325.1-201ENST00000566449 554 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 MIR4293-201ENST00000584305 78 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC090970.3-201ENST00000612566 866 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC093838.1-201ENST00000613014 469 ntBASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX9Q9Y5X1 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 RNU6-511P-201ENST00000363496 107 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AL139415.2-201ENST00000431968 163 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AL596276.1-201ENST00000434465 418 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC093156.1-201ENST00000440382 670 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 RNU7-59P-201ENST00000459101 61 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC091179.1-201ENST00000461606 579 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC006445.1-201ENST00000491925 405 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 FAM92A1P2-202ENST00000504766 877 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 MLLT10P2-201ENST00000506434 249 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 OR5AQ1P-201ENST00000527596 927 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 SNRPGP16-201ENST00000533275 226 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 UBL5P2-201ENST00000583788 219 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC004908.2-201ENST00000609090 574 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC004696.1-201ENST00000614345 607 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AC006338.1-201ENST00000618453 749 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 AL136313.1-201ENST00000624804 202 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 MIR3688-2-201ENST00000636963 87 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 CR848007.1-201ENST00000442354 1699 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX9Q9Y5X1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms