Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 AL354950.2-201ENST00000617939 290 ntBASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 AL357559.1-201ENST00000622228 274 ntBASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 AC100810.6-201ENST00000638068 285 ntBASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGB1Q9Y5G3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU4-79P-201ENST00000362764 141 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-511P-201ENST00000363496 107 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-335P-201ENST00000364563 113 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU4-20P-201ENST00000365601 151 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-339P-201ENST00000384310 107 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-332P-201ENST00000391193 108 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU2-71P-201ENST00000411395 189 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 MTCYBP8-201ENST00000422855 651 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 SRIP2-201ENST00000428470 166 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AL118496.2-201ENST00000448300 230 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RPS20P24-201ENST00000457473 361 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU7-63P-201ENST00000459054 62 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 HMGN2P26-201ENST00000463169 339 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 COX7A2P2-201ENST00000505291 250 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-410P-201ENST00000517006 107 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AP001029.3-201ENST00000588063 596 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 SNRPGP15-201ENST00000600149 222 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007179.3-201ENST00000604976 235 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC019176.2-201ENST00000611579 315 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 AC118273.1-201ENST00000525324 3006 ntBASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB1Q9Y5G3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 MIR491-201ENST00000384877 84 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL162578.1-201ENST00000406202 378 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC068533.1-201ENST00000418542 415 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 OR4K11P-201ENST00000431829 904 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 MTATP6P16-201ENST00000434543 526 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 MRPL50P4-201ENST00000446432 475 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 HMGN2P16-201ENST00000456802 261 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-277P-201ENST00000516272 106 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.701-201ENST00000516812 110 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORA70.24-201ENST00000517233 118 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC105029.1-201ENST00000520250 669 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 OR4R1P-201ENST00000529879 463 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 OR5BN1P-201ENST00000532955 829 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms