Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-105P-201ENST00000363909 104 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SKP124-201ENST00000364730 341 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-166P-201ENST00000384371 107 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-159P-201ENST00000391080 106 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AL035079.1-201ENST00000405210 287 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 EIF1AXP1-201ENST00000419267 435 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SL610P-201ENST00000463845 291 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 RNA5SP34-201ENST00000516887 130 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 SNORA31.19-201ENST00000517079 126 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC069307.1-201ENST00000602820 447 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AL357075.2-201ENST00000614906 189 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AC131238.1-201ENST00000617135 328 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 AL353748.2-201ENST00000622148 471 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 MIR6730-201ENST00000622213 67 ntBASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB3Q9Y5E6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 U3.7-201ENST00000363668 216 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 SNORA22-201ENST00000383907 134 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-578P-201ENST00000390980 103 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RNA5SP89-201ENST00000410300 108 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RNU4-34P-201ENST00000410431 124 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AC119751.6-201ENST00000416712 186 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RPL12P18-201ENST00000437175 325 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AC124916.1-201ENST00000444020 547 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RNU7-107P-201ENST00000459121 61 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 snoU13.3-201ENST00000459441 104 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 SNORD125-201ENST00000459538 96 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RPL21P126-201ENST00000470049 478 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SL570P-201ENST00000484405 292 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SKP179-201ENST00000516126 217 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 RNA5SP76-201ENST00000516277 87 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 IGLV3-30-201ENST00000524362 298 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 AC241585.2-209ENST00000638217 143 ntBASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB3Q9Y5E6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AP001029.2-203ENST00000589795 4910 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RNU1-19P-201ENST00000363306 165 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 SNORA72.2-201ENST00000365028 127 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 U8.10-201ENST00000384260 133 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 Y_RNA.525-201ENST00000384570 113 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-178P-201ENST00000384631 104 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC091390.3-201ENST00000426478 338 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RPL7AP61-201ENST00000443410 636 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AL591623.2-201ENST00000449978 222 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 snoU109.2-201ENST00000459316 135 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SL72P-201ENST00000460697 269 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC006499.6-201ENST00000511169 607 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RNA5SP228-201ENST00000516232 133 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RNU6-589P-201ENST00000516485 107 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC021678.3-201ENST00000517893 476 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 MIR4744-201ENST00000581563 82 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms