Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MT-TH-201ENST00000387441 69 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 ELOCP17-201ENST00000414751 326 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL353777.1-201ENST00000425552 326 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL139132.1-201ENST00000431587 344 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MTATP6P30-201ENST00000443540 664 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 COX6CP12-201ENST00000446748 202 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MTND3P7-201ENST00000474435 343 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC097462.2-201ENST00000504623 481 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 RNU6-201P-201ENST00000517100 61 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 OSBPL9P5-201ENST00000542581 171 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 MIR3146-201ENST00000580367 79 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC020895.1-201ENST00000595362 272 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 KC877982.1-201ENST00000602313 470 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL627309.6-201ENST00000606857 840 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AL137790.1-201ENST00000634283 177 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 AC138915.1-201ENST00000565427 1685 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC096644.4-201ENST00000563417 2912 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 RNY3P13-201ENST00000365542 102 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 MIR634-201ENST00000385208 97 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 U3.26-201ENST00000391236 204 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 RPL7P10-201ENST00000417407 739 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC093156.1-201ENST00000440382 670 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 COX6CP2-201ENST00000444980 225 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 DDX3P2-201ENST00000446138 111 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 USP9YP12-201ENST00000450481 570 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC109486.1-201ENST00000486833 374 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC087373.1-201ENST00000524920 491 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC008277.2-201ENST00000605196 797 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
ATG4BQ9Y4P1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL355596.1-201ENST00000565399 3996 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 FTLP6-201ENST00000355274 422 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 SNORA80A-201ENST00000363922 136 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 MIR181A2-201ENST00000384863 110 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 RNA5SP354-201ENST00000391247 136 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL122016.1-201ENST00000403365 367 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL021407.1-201ENST00000404531 386 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 FCF1P10-201ENST00000407590 479 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 RPS15AP12-201ENST00000419498 388 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL356583.2-201ENST00000426536 280 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 RPS20P5-201ENST00000434808 360 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 NIPA2P5-201ENST00000452282 464 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms