Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RN7SKP158-201ENST00000410453 326 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNA5SP80-201ENST00000410475 111 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RPS24P7-201ENST00000416921 246 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 USP9YP11-201ENST00000427537 717 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 FCF1P1-201ENST00000432690 571 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 GTF2IP3-201ENST00000433887 494 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 FABP5P14-201ENST00000437273 393 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 USP9YP10-201ENST00000454868 628 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 KLF3P2-201ENST00000465138 268 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-390P-201ENST00000516259 103 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNA5SP165-201ENST00000517142 115 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AC093012.1-202ENST00000549403 582 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AC106782.4-201ENST00000568264 210 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 VN1R83P-201ENST00000595685 445 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AL160281.1-201ENST00000605307 311 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AL121652.1-201ENST00000608851 448 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AC024581.2-201ENST00000619986 252 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 AP003485.2-201ENST00000623636 610 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL359511.1-201ENST00000402970 211 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL109913.1-201ENST00000421173 514 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC244035.1-201ENST00000430042 390 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL161651.1-201ENST00000440882 223 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 CECR9-201ENST00000453421 199 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 RPS3P1-201ENST00000456781 192 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AP001486.1-201ENST00000463339 476 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 RPL22P13-201ENST00000493291 347 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 MRPS33P3-201ENST00000513456 322 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 RNU4-29P-201ENST00000515943 174 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 MTCO2P15-201ENST00000532655 656 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC023538.1-201ENST00000534576 736 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC087241.2-201ENST00000535801 324 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC006199.1-201ENST00000548728 219 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 RPP40P2-201ENST00000603596 712 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC007621.1-201ENST00000604544 437 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL158211.2-201ENST00000607282 395 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AC104985.3-201ENST00000623479 597 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL160394.1-201ENST00000624765 724 ntBASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
RHBDD3Q9Y3P4 AL109809.4-201ENST00000603520 2185 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-19P-201ENST00000384718 107 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AL021407.1-201ENST00000404531 386 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 MIR1284-201ENST00000408337 120 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RNA5SP270-201ENST00000411361 118 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 TPT1P14-201ENST00000448018 505 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AL441985.1-201ENST00000457727 251 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 MEMO1P3-201ENST00000459811 302 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC034222.1-201ENST00000494052 532 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC026436.1-201ENST00000510537 270 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RNU7-193P-201ENST00000516723 65 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RN7SKP258-201ENST00000517151 304 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 RPL7P20-201ENST00000520308 745 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC118273.2-201ENST00000532092 465 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms