Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-338P-201ENST00000383888 105 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 SNORA22-201ENST00000383907 134 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 SNORA22C-201ENST00000384614 134 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 PTENP1-201ENST00000447117 1215 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC079448.1-201ENST00000449377 373 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AL096803.2-201ENST00000450032 677 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 RPL30P5-201ENST00000494923 336 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AP000926.3-201ENST00000497201 299 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 LTV1P1-201ENST00000510683 1237 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC092470.1-201ENST00000546187 132 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 MIR4421-201ENST00000578133 69 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 MTND2P41-201ENST00000637599 773 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AP000560.1-201ENST00000624150 1937 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AC008568.2-201ENST00000623862 2313 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 SNORA62.1-201ENST00000364287 154 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 SNORD14B-201ENST00000364533 90 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-1035P-201ENST00000384477 107 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AL356421.1-201ENST00000403255 413 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 RNU4-62P-201ENST00000410125 130 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AC004965.1-201ENST00000413033 213 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AC092648.1-201ENST00000425870 423 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 TOMM22P2-201ENST00000430735 237 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 MTND6P13-201ENST00000443510 523 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AC008379.1-201ENST00000463655 464 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 SUMO2P6-201ENST00000505273 288 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-362P-201ENST00000516736 90 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AP001004.1-201ENST00000582468 324 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AC016727.1-205ENST00000605437 569 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AL021997.1-201ENST00000605757 193 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 U4atac.1-201ENST00000618345 95 ntBASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.78□□□□□ -2.28
UBE2D4Q9Y2X8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-14P-201ENST00000384630 106 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 MIR513A1-201ENST00000385138 129 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 Y_RNA.595-201ENST00000410403 105 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 BTF3P4-201ENST00000418852 495 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 HMGB1P9-201ENST00000429856 646 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 MICF-203ENST00000432679 129 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC241584.1-201ENST00000438469 1241 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 BX322784.1-201ENST00000455793 1077 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 OR2A41P-201ENST00000473586 105 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC092902.1-201ENST00000486999 259 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 RPL36AP21-201ENST00000490372 323 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC139453.3-201ENST00000493276 369 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 SNORA44.1-201ENST00000517031 108 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 MIR4295-201ENST00000585286 85 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 snoU13.31-201ENST00000607291 104 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC013468.1-201ENST00000608680 598 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AL353770.2-201ENST00000620024 78 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC068057.2-201ENST00000624047 895 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC091925.2-201ENST00000625059 256 ntBASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.77□□□□□ -2.29
UBE2D4Q9Y2X8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 CBX3P1-201ENST00000325243 554 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNA5SP432-201ENST00000362480 116 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-452P-201ENST00000384406 107 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 MIR218-1-201ENST00000384999 110 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-821P-201ENST00000390995 107 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 DSTNP4-201ENST00000399472 474 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms