Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 MT-TH-201ENST00000387441 69 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P75-201ENST00000396599 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL512633.1-201ENST00000399931 655 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P28-201ENST00000401418 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL592114.1-201ENST00000403842 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL031121.1-201ENST00000406553 254 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC097713.2-201ENST00000430199 356 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPS15AP7-201ENST00000439294 405 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 FABP5P13-201ENST00000452144 328 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P39-201ENST00000463605 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P93-201ENST00000480465 489 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC087190.1-201ENST00000484462 480 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC093591.1-201ENST00000491435 481 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P16-201ENST00000495531 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC026801.1-201ENST00000497178 464 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC110794.1-201ENST00000505816 425 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC098591.2-201ENST00000510152 315 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AP003122.4-201ENST00000530980 758 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 RPL21P12-201ENST00000559810 515 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC037471.2-201ENST00000564941 598 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC135628.1-201ENST00000568867 534 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC007151.1-201ENST00000572774 483 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 MIR3944-201ENST00000581277 108 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC009977.1-201ENST00000586015 570 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC174048.1-201ENST00000603389 144 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL162713.1-201ENST00000604480 262 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AC073657.2-201ENST00000605661 303 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AP002360.4-201ENST00000606980 481 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 AL392048.1-201ENST00000613946 534 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 MIR7975-201ENST00000619350 68 ntBASIC2.61□□□□□ -1.99
FOXA2Q9Y261 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
FOXA2Q9Y261 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 GNG5P1-201ENST00000255500 204 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 RN7SKP226-201ENST00000364912 300 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SET-203ENST00000372688 801 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 DYNLT3P1-201ENST00000378574 347 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 RNA5SP171-201ENST00000391071 115 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 RPL7P10-201ENST00000417407 739 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 MTND2P18-201ENST00000419962 1030 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AL445567.1-201ENST00000439121 144 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 TAF9P1-201ENST00000445421 515 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 TAF9P2-201ENST00000454958 515 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 RPL21P13-201ENST00000488305 481 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC007182.2-201ENST00000489251 402 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC022447.1-201ENST00000515358 464 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SCARNA17.1-201ENST00000516211 143 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SCARNA17.2-201ENST00000516334 143 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 MIR3167-201ENST00000579623 85 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AL451007.1-201ENST00000595491 289 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC073544.2-201ENST00000601155 540 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 NRBF2P5-201ENST00000603087 788 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC131902.3-201ENST00000611767 581 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC108479.2-201ENST00000617314 601 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC099654.13-201ENST00000639774 207 ntBASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
FOXA2Q9Y261 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms