Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC012213.4-201ENST00000606457 354 ntBASIC1.54□□□□□ -2.16
SHANK2Q9UPX8 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK2Q9UPX8 AC004908.2-201ENST00000609090 574 ntBASIC1.54□□□□□ -2.16
SHANK2Q9UPX8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 NAP1L1P3-201ENST00000462291 880 ntBASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 SNORA31.20-201ENST00000517111 133 ntBASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AL009028.1-201ENST00000604895 802 ntBASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 AL161629.2-201ENST00000615347 275 ntBASIC1.53□□□□□ -2.16
SHANK2Q9UPX8 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 Z86062.1-201ENST00000406773 777 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 GDI2P2-201ENST00000445131 608 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 PABPC1P3-201ENST00000469174 459 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 MIR4714-201ENST00000580728 77 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC108706.1-201ENST00000611053 297 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 RMST_5.1-201ENST00000618704 126 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC018755.4-201ENST00000619715 454 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC068880.5-201ENST00000624331 290 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 TEX21P-201ENST00000447107 1476 ntBASIC1.52□□□□□ -2.17
SHANK2Q9UPX8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 RN7SKP200-201ENST00000410564 320 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 RNU6-193P-201ENST00000410977 107 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 SNORD114-21-201ENST00000606412 72 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 AC095031.1-201ENST00000623685 672 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 MIR924-201ENST00000638017 53 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 AL442644.1-201ENST00000454390 3105 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 AC025263.3-201ENST00000622965 1396 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 AC091812.1-201ENST00000432235 1948 ntBASIC1.51□□□□□ -2.17
SHANK2Q9UPX8 SNORA38-201ENST00000363946 132 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 RNA5SP354-201ENST00000391247 136 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 SNORD23.1-201ENST00000408212 104 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 CBX3P6-201ENST00000430257 527 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 DUXAP8-207ENST00000456786 622 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 snoU13.7-201ENST00000459220 104 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 SNORA31.18-201ENST00000517043 134 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AC107954.1-201ENST00000565906 727 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AC233266.2-201ENST00000567067 528 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 HMGB1P24-202ENST00000615653 685 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 RNU6-198P-201ENST00000384258 104 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 RNU6-837P-201ENST00000391056 108 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 RPS4XP3-201ENST00000398541 413 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 OR6K5P-201ENST00000447050 945 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 RNU6-319P-201ENST00000516025 108 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 HMGB1P46-201ENST00000520062 610 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 MIR3117-201ENST00000584034 78 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 MIR4658-201ENST00000584344 65 ntBASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK2Q9UPX8 AC008669.1-201ENST00000565823 2178 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 MIR676-201ENST00000390702 67 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC093155.1-201ENST00000440164 826 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 SNORD97-201ENST00000459187 142 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 BTF3P12-201ENST00000519620 469 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC090616.3-201ENST00000582184 217 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC092474.3-201ENST00000603022 568 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 DPRXP5-201ENST00000604662 539 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC005332.10-201ENST00000612725 619 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC092140.2-201ENST00000618027 521 ntBASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK2Q9UPX8 MTND5P9-201ENST00000503854 1755 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 RNU6-716P-201ENST00000365621 103 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 VTRNA1-3-201ENST00000365645 89 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 SNORD65-201ENST00000391079 73 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 AC092745.2-202ENST00000411880 369 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 ARL2BPP3-201ENST00000421226 480 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 MTCO3P46-201ENST00000425787 232 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 RPL23AP35-201ENST00000451906 501 ntBASIC1.48□□□□□ -2.17
SHANK2Q9UPX8 AC078857.1-201ENST00000469870 667 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms