Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 uc_338.12-201ENST00000616344 181 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC084757.4-201ENST00000616350 526 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 OR5AK4P-201ENST00000635912 903 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC073325.2-201ENST00000339545 159 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 SNORA71.3-201ENST00000362582 128 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RNU6-1181P-201ENST00000384191 106 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 SNORA7.4-201ENST00000384249 137 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RNU4-65P-201ENST00000410473 140 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MTND1P21-201ENST00000412991 285 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 PPP1R11P2-201ENST00000423543 382 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL445584.1-201ENST00000431451 330 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 HSPD1P21-201ENST00000436541 245 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 RPL26P6-201ENST00000440913 438 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC016696.1-201ENST00000446949 318 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC098799.2-201ENST00000509466 868 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC022483.1-201ENST00000514020 567 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 Vault.3-201ENST00000516676 95 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 SNORA31.22-201ENST00000517204 135 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MTCO2P4-201ENST00000517968 247 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC022616.3-201ENST00000523940 148 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 FAM60DP-201ENST00000524174 632 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL391840.1-201ENST00000571144 367 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 EIF1P4-201ENST00000572664 335 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MIR3167-201ENST00000579623 85 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC012443.1-201ENST00000605605 231 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 TUG1_2.1-201ENST00000614234 87 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC004696.1-201ENST00000614345 607 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC072046.2-201ENST00000618366 268 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MIR6130-201ENST00000619419 109 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AC026585.1-201ENST00000619582 524 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL360181.4-201ENST00000621752 134 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 AL359740.1-201ENST00000624340 592 ntBASIC2.85□□□□□ -1.95
NDE1Q9NXR1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
NDE1Q9NXR1 ZNF285B-201ENST00000561698 1767 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC009812.4-201ENST00000569134 1805 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 GABRG2-229ENST00000641017 3628 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 TAB3P1-202ENST00000452645 1634 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC027514.1-201ENST00000588561 1603 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RNU6-50P-201ENST00000362356 103 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 SNORA23-201ENST00000365128 182 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 SNORA20.2-201ENST00000383922 131 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RNU6-39P-201ENST00000384344 107 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 MIR592-201ENST00000384959 97 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RNU6-278P-201ENST00000390945 109 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RNU6-754P-201ENST00000391166 107 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AL109755.1-201ENST00000401791 649 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 BX323014.1-201ENST00000412876 237 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 DUTP6-201ENST00000425573 462 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 MTATP6P4-201ENST00000427725 675 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC005019.1-201ENST00000436455 431 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RPL35AP22-201ENST00000436855 335 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 MTND1P34-201ENST00000438556 671 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC005094.1-201ENST00000440420 368 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 MTND1P12-201ENST00000455231 147 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC108059.3-201ENST00000456388 214 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 snoU13.4-201ENST00000458916 104 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RPL9P6-201ENST00000492764 598 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC091133.4-201ENST00000511142 308 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RNA5SP468-201ENST00000516782 93 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 OR5B10P-201ENST00000532869 642 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 HSPE1P20-201ENST00000538133 289 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 AC123904.3-201ENST00000547218 814 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.84□□□□□ -1.95
NDE1Q9NXR1 RPL21P12-201ENST00000559810 515 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms