Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HINT3Q9NQE9 UBE2L2-201ENST00000254302 429 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNY4P14-201ENST00000363656 96 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNU6-1090P-201ENST00000364065 94 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 Y_RNA.402-201ENST00000383972 102 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 Y_RNA.576-201ENST00000384781 102 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 PTMAP5-201ENST00000393073 333 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 BTF3P7-201ENST00000407097 488 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RPS12P24-201ENST00000412619 387 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RAB9AP3-201ENST00000412737 573 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC017079.2-201ENST00000416102 485 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RPL31P12-201ENST00000422587 358 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ELOCP14-201ENST00000428070 331 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 GOT2P5-201ENST00000433995 546 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ELOCP7-201ENST00000439968 331 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RAB9AP1-201ENST00000449393 573 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNA5SP310-201ENST00000459084 116 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC078785.3-201ENST00000476607 425 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 KC877373.1-201ENST00000479066 408 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC021205.2-201ENST00000480069 347 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AL160314.1-201ENST00000490836 438 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RBBP4P6-201ENST00000508098 202 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC105417.1-201ENST00000514691 285 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RNA5SP503-201ENST00000517047 117 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 TRAV28-201ENST00000557548 323 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC008521.1-201ENST00000587471 187 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC098826.3-201ENST00000603823 466 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC022893.3-201ENST00000607665 437 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC009570.1-201ENST00000609599 745 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AC012409.4-201ENST00000612923 249 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 AL354950.2-201ENST00000617939 290 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 MIR1321-201ENST00000637766 79 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.16□□□□□ -1.9
HINT3Q9NQE9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HINT3Q9NQE9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.9
HINT3Q9NQE9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HINT3Q9NQE9 AP001148.1-201ENST00000624124 2359 ntBASIC3.15□□□□□ -1.9
HINT3Q9NQE9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HINT3Q9NQE9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AC002546.1-201ENST00000588041 2504 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL513302.2-201ENST00000562313 1842 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNU6-1029P-201ENST00000384109 107 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 SNORA5A-201ENST00000384111 134 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 MIR325-201ENST00000385260 98 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNU6-387P-201ENST00000411331 105 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 USP9YP27-201ENST00000418455 438 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 MTCO1P20-201ENST00000425366 358 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AC016691.1-201ENST00000441321 413 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 CACYBPP2-201ENST00000453625 678 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL162395.1-201ENST00000457882 422 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AC233702.1-201ENST00000482905 502 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RPL39P36-201ENST00000490784 156 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AC092436.1-201ENST00000506450 503 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.15□□□□□ -1.91
HINT3Q9NQE9 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 AL117351.2-201ENST00000513571 157 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNU6-1281P-201ENST00000516223 105 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
HINT3Q9NQE9 RNA5SP291-201ENST00000517222 105 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms