Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTA1Q9NP79 RNU6-50P-201ENST00000362356 103 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 Y_RNA.166-201ENST00000363730 102 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 RNU4-66P-201ENST00000365199 138 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 MIR218-2-201ENST00000385006 110 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 RNU6-550P-201ENST00000391057 101 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 PTMAP5-201ENST00000393073 333 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTA1Q9NP79 RPL7P10-201ENST00000417407 739 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC245054.1-201ENST00000420944 258 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC093106.2-201ENST00000428212 385 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AP000907.1-201ENST00000428428 510 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 USP9YP8-201ENST00000441913 500 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 HMGN2P26-201ENST00000463169 339 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 RPL21P99-201ENST00000480369 423 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 HMGN1P12-201ENST00000499125 195 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 RAC1P2-201ENST00000511164 579 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC008549.1-201ENST00000512900 643 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC078814.3-201ENST00000553036 491 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC005951.2-201ENST00000576282 495 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC002545.1-201ENST00000592511 181 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC005261.5-201ENST00000596280 355 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC020914.4-201ENST00000597690 277 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC007619.2-201ENST00000605743 379 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 AC096577.2-201ENST00000611455 153 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 MIR7975-201ENST00000619350 68 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTA1Q9NP79 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTA1Q9NP79 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTA1Q9NP79 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 MT-TD-201ENST00000387419 68 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 RNU6-332P-201ENST00000391193 108 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 EEF1A1P40-201ENST00000412883 573 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 MTCO3P46-201ENST00000425787 232 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 AL159987.2-201ENST00000432754 307 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 SNORA71B-202ENST00000439232 272 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 RPL21P23-201ENST00000446654 460 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC008264.1-201ENST00000447612 367 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC007547.1-201ENST00000462177 490 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC084198.1-201ENST00000477747 402 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 RNU6-123P-201ENST00000516163 102 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 RNU6-875P-201ENST00000516488 106 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 OR5D17P-201ENST00000531492 978 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 FGF7P1-201ENST00000582820 288 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC013553.2-201ENST00000604244 589 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 AL390240.1-201ENST00000612950 384 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTA1Q9NP79 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTA1Q9NP79 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.22□□□□□ -1.73
VTA1Q9NP79 AC121333.1-201ENST00000567488 2709 ntBASIC4.22□□□□□ -1.73
VTA1Q9NP79 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VTA1Q9NP79 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.21□□□□□ -1.73
VTA1Q9NP79 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTA1Q9NP79 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 ZNF962P-201ENST00000443465 3140 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 RNU6-845P-201ENST00000362578 103 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 RPS12P24-201ENST00000412619 387 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 NCOR1P3-201ENST00000420479 303 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.21□□□□□ -1.74
VTA1Q9NP79 CYCSP4-201ENST00000429682 331 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL591212.2-201ENST00000433923 257 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AL671855.1-201ENST00000446875 1203 ntBASIC4.21□□□□□ -1.74
VTA1Q9NP79 AC104058.1-201ENST00000448028 297 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms