Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 TRBVB-201ENST00000477100 408 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 HMGB1P35-201ENST00000503360 598 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 GMPSP1-201ENST00000514075 579 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 RNA5SP362-201ENST00000516048 118 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC144568.1-201ENST00000520139 137 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC034114.1-201ENST00000520293 285 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 IFITM8P-201ENST00000522529 394 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC105129.1-201ENST00000560250 297 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 CYP4A43P-201ENST00000568156 121 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC011487.3-201ENST00000593607 453 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AP001282.2-201ENST00000616149 309 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 AL391684.1-202ENST00000641293 1636 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNU1-35P-201ENST00000362782 153 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNA5SP307-201ENST00000362863 116 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RN7SKP160-201ENST00000363804 340 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNU6-595P-201ENST00000363944 107 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNU6-512P-201ENST00000364438 103 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RN7SKP227-201ENST00000364445 330 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 Y_RNA.478-201ENST00000384358 107 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 SNORA17A-201ENST00000391185 133 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 SAR1AP2-201ENST00000392696 594 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL592148.1-201ENST00000413568 445 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC119751.6-201ENST00000416712 186 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RPS20P1-201ENST00000434853 354 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 HLA-N-201ENST00000437516 135 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC069285.2-201ENST00000440210 275 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL353748.1-201ENST00000440753 474 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RPEP5-201ENST00000441137 268 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC087588.1-201ENST00000462203 316 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RPL7P5-201ENST00000471472 736 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 SCARNA22-201ENST00000503991 125 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNU6-911P-201ENST00000516523 104 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNU6-1315P-201ENST00000517187 99 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 RPL23AP97-201ENST00000568955 471 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 MIR1273C-201ENST00000578669 77 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 MIR3614-201ENST00000581261 86 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AL390123.1-201ENST00000603216 237 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 AP001005.3-201ENST00000622049 129 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 SNORA17.5-201ENST00000630429 132 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 U2.22-201ENST00000636441 106 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 U6.104-201ENST00000637979 90 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SSU72Q9NP77 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSU72Q9NP77 PABPC1P6-201ENST00000445594 1829 ntBASIC4.56□□□□□ -1.68
SSU72Q9NP77 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.55□□□□□ -1.68
SSU72Q9NP77 RPL9P7-201ENST00000330965 580 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 RNU6-398P-201ENST00000384143 109 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 Y_RNA.785-201ENST00000384290 109 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 Y_RNA.471-201ENST00000384312 102 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 AL096701.2-201ENST00000416920 238 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 AL513043.1-201ENST00000439124 535 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 RNU6-1037P-201ENST00000459571 107 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 RPL9P9-202ENST00000466501 579 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 RPS15AP34-201ENST00000487776 387 ntBASIC4.55□□□□□ -1.68
SSU72Q9NP77 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSU72Q9NP77 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms