Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 MRPL42P2-201ENST00000403169 426 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC099548.1-201ENST00000421443 426 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 RPL23AP58-201ENST00000440453 469 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 MTND2P4-201ENST00000445034 1004 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 TAF9P1-201ENST00000445421 515 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 TAF9P2-201ENST00000454958 515 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 RNU6-420P-201ENST00000458780 107 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 RPL32P34-201ENST00000486380 400 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC010587.1-201ENST00000505809 469 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 Y_RNA.688-201ENST00000516565 95 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 TRAV28-201ENST00000557548 323 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AL590229.1-201ENST00000603497 542 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 uc_338.12-201ENST00000616344 181 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 MTND1P37-201ENST00000636562 264 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 AC099654.13-201ENST00000639774 207 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 ELL2P3-201ENST00000457883 1602 ntBASIC2.79□□□□□ -1.96
VIPAS39Q9H9C1 RNU6-799P-201ENST00000363567 107 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNY4P34-201ENST00000364779 95 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNU6-741P-201ENST00000383889 107 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 MIR449B-201ENST00000384995 97 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 SNORA40.3-201ENST00000390964 122 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AL139397.2-201ENST00000404529 772 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNU2-62P-201ENST00000410868 191 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNU6-195P-201ENST00000411352 109 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC119618.1-201ENST00000434191 222 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 Z82210.1-201ENST00000440037 231 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 BNIP3P2-201ENST00000441221 577 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 CYCSP35-201ENST00000451978 304 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 NIPA2P5-201ENST00000452282 464 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RPL12P25-201ENST00000455592 494 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RPL27AP5-201ENST00000469428 449 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RBM43P1-201ENST00000476891 1081 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNA5SP471-201ENST00000516971 106 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNA5SP337-201ENST00000517007 109 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RNA5SP291-201ENST00000517222 105 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC100870.1-201ENST00000522035 505 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC010620.1-201ENST00000601088 1102 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 Z94722.1-201ENST00000604328 474 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC103710.2-201ENST00000609912 942 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AL589994.2-201ENST00000621124 579 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC073308.1-201ENST00000623696 305 ntBASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.78□□□□□ -1.96
VIPAS39Q9H9C1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.78□□□□□ -1.97
VIPAS39Q9H9C1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.78□□□□□ -1.97
VIPAS39Q9H9C1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.97
VIPAS39Q9H9C1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 RNU5E-1-201ENST00000362477 120 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-1284P-201ENST00000363701 100 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 U8.8-201ENST00000365399 135 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 SNORA48.7-201ENST00000391302 135 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 MIR1289-1-201ENST00000408836 144 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 RN7SKP142-201ENST00000411236 328 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 USP9YP15-201ENST00000442391 422 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AL022238.1-201ENST00000442557 355 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC080014.1-201ENST00000496877 1201 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 NDUFB4P2-201ENST00000509515 391 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC117532.1-201ENST00000514638 323 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 SNORA31.11-201ENST00000516528 139 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AP003467.2-201ENST00000520175 319 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC128657.1-201ENST00000549459 145 ntBASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.77□□□□□ -1.97
VIPAS39Q9H9C1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms