Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AL591212.2-201ENST00000433923 257 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 MTND6P13-201ENST00000443510 523 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 RPL23AP20-201ENST00000447965 421 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 RPL21P13-201ENST00000488305 481 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC139453.3-201ENST00000493276 369 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 MRPS36P2-201ENST00000512569 299 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 MIR3158-1-201ENST00000583596 81 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC024220.1-201ENST00000603675 484 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AL355598.1-201ENST00000604169 202 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AP002360.4-201ENST00000606980 481 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AL392048.1-201ENST00000613946 534 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 CR848007.1-201ENST00000442354 1699 ntBASIC3.2□□□□□ -1.9
CCDC68Q9H2F9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC110491.1-201ENST00000562191 2010 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC073343.1-201ENST00000328239 651 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 RNY1P12-201ENST00000364251 105 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 RNY4P34-201ENST00000364779 95 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 HMGN1P14-201ENST00000412459 517 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL353729.1-201ENST00000425044 720 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 HMGB1P9-201ENST00000429856 646 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 SNORA84-201ENST00000459229 133 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 snoU109.1-201ENST00000459339 135 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC126182.1-201ENST00000478134 357 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AP002812.1-201ENST00000495378 474 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 RNU2-46P-201ENST00000517038 113 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC091304.9-201ENST00000612091 226 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC011939.3-201ENST00000613686 466 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC130324.3-201ENST00000614165 542 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AC084035.1-201ENST00000634543 607 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 AL512643.1-201ENST00000635735 524 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 Z99571.1-201ENST00000636677 394 ntBASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC68Q9H2F9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 SNORD116-8-201ENST00000384365 95 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 RNU6-658P-201ENST00000384606 106 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 U3.19-201ENST00000390893 196 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC127391.1-201ENST00000411737 98 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC098614.2-201ENST00000426040 255 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 PGBD4P3-201ENST00000440731 581 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 RPS27AP8-201ENST00000452665 445 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AL033528.1-201ENST00000453780 140 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC128713.1-201ENST00000471495 306 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC007182.2-201ENST00000489251 402 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 HSPE1P20-201ENST00000538133 289 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 RPL21P12-201ENST00000559810 515 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 MIR3682-201ENST00000581338 84 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC174048.1-201ENST00000603389 144 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 Z99497.2-201ENST00000603634 310 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC245389.1-201ENST00000605141 529 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 AC022893.3-201ENST00000607665 437 ntBASIC3.18□□□□□ -1.9
CCDC68Q9H2F9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms