Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.384-201ENST00000383909 102 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MIR450B-201ENST00000401182 78 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 PPIAP31-201ENST00000405422 495 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MIR1193-201ENST00000408109 78 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 RAC1P3-201ENST00000416129 580 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 KC877373.1-201ENST00000479066 408 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC012181.1-201ENST00000479895 423 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 RNU6-1315P-201ENST00000517187 99 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MIR2116-201ENST00000517221 80 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MIR1273C-201ENST00000578669 77 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MIR5684-201ENST00000585074 65 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 MTND1P37-201ENST00000636562 264 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 AC068254.2-201ENST00000623938 3577 ntBASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC113Q9H0I3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RNU6-254P-201ENST00000363377 107 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.184-201ENST00000363884 108 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RNU6-371P-201ENST00000364283 108 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.301-201ENST00000364990 103 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.535-201ENST00000384612 99 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RPL21P65-201ENST00000406094 466 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RN7SKP263-201ENST00000411194 309 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RPLP0P7-201ENST00000416050 667 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AL358472.1-201ENST00000431295 329 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC005019.1-201ENST00000436455 431 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 SNORA14.1-201ENST00000516113 141 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 RNU6-256P-201ENST00000516747 97 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AP000889.2-201ENST00000532684 490 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC090115.3-201ENST00000553218 849 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 HSPE1P5-201ENST00000561489 272 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 AL355375.2-201ENST00000574825 175 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 MIR432-201ENST00000606207 94 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 MIR7702-201ENST00000621931 59 ntBASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC113Q9H0I3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AP001486.2-201ENST00000561652 5113 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 HSPE1P12-201ENST00000412576 301 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 RPL21P109-201ENST00000422213 475 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AL117339.2-201ENST00000430475 180 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 RNU7-66P-201ENST00000459469 62 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 MTCO1P29-201ENST00000496868 288 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 RPL39P5-202ENST00000512505 151 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.682-201ENST00000516457 100 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 CYCSP27-201ENST00000527643 293 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 MIR3942-201ENST00000585264 109 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 SNORD39.4-201ENST00000620099 78 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AL133216.2-202ENST00000634512 349 ntBASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC113Q9H0I3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms