Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM204CP-201ENST00000424489 642 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 RAC1P8-201ENST00000427086 527 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 Z82210.1-201ENST00000440037 231 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 OR10R1P-201ENST00000441524 1141 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AP1S2P1-201ENST00000457344 379 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC092757.1-201ENST00000467293 467 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC090453.1-201ENST00000495560 436 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC138853.1-201ENST00000503549 823 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC096571.1-202ENST00000506634 735 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC117532.1-201ENST00000514638 323 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 SNORA76.2-201ENST00000517095 137 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AP005902.1-201ENST00000521358 186 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 OR4K8P-201ENST00000578842 1048 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 MIR4666A-201ENST00000580160 79 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 DUXAP11-201ENST00000603858 526 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AL450270.1-201ENST00000606160 391 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC104307.1-201ENST00000616142 196 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
UPF3BQ9BZI7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 HMGB1P17-201ENST00000403495 628 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AC092634.6-201ENST00000418558 192 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 SFR1P2-201ENST00000421841 730 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AL445685.2-201ENST00000422551 342 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 MTND4LP7-201ENST00000431728 294 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 THAP5P1-201ENST00000439089 262 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 USP9YP15-201ENST00000442391 422 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 OSTCP8-201ENST00000445117 448 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AC108729.2-201ENST00000476543 840 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 MTCO2P9-201ENST00000503214 694 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 COL6A4P2-205ENST00000509855 506 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AK6P1-201ENST00000540219 478 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AC110588.1-201ENST00000559699 137 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AGGF1P5-201ENST00000567900 919 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 MIR4419B-201ENST00000577260 68 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 RPP40P2-201ENST00000603596 712 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 DUXAP10-204ENST00000612052 616 ntBASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
UPF3BQ9BZI7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 RNU6-741P-201ENST00000383889 107 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 RNU6-220P-201ENST00000390919 107 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 SNORA17.3-201ENST00000391159 129 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 Z82205.1-201ENST00000428456 297 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 HMGB1P9-201ENST00000429856 646 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC016691.1-201ENST00000441321 413 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC068781.1-201ENST00000488231 618 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC090502.2-201ENST00000549267 280 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC107214.2-201ENST00000608204 634 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AC008498.1-201ENST00000613012 531 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AP003400.5-201ENST00000624827 617 ntBASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.15□□□□□ -2.07
UPF3BQ9BZI7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SNORA46.1-201ENST00000391069 153 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 RNU6-932P-201ENST00000391108 106 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC096649.2-201ENST00000416186 393 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AL451074.3-201ENST00000437709 472 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SDCBPP1-201ENST00000440192 890 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 MRPS17P3-201ENST00000465453 385 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms