Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP002748.2-201ENST00000528671 348 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AP000867.2-201ENST00000532468 320 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 RPL23AP84-201ENST00000571193 464 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 KC877982.1-201ENST00000602313 470 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AC012065.4-201ENST00000602445 679 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 RPL23AP88-201ENST00000605759 454 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AC027807.2-201ENST00000616099 408 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AC008147.4-201ENST00000617570 1204 ntBASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HDHD3Q9BSH5 RNU6-1284P-201ENST00000363701 100 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 ZNF90P2-204ENST00000419323 1075 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 CYCSP46-201ENST00000423569 204 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 PGBD4P3-201ENST00000440731 581 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 Z96811.1-201ENST00000445880 108 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AP000797.1-201ENST00000478870 387 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 RPF2P2-201ENST00000504693 896 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 RNA5SP282-201ENST00000516355 108 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC025881.1-201ENST00000518851 512 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 HSPE1P20-201ENST00000538133 289 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 MRPS36P5-201ENST00000551909 298 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC012414.6-201ENST00000568241 401 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC012435.1-202ENST00000568772 240 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC068135.2-201ENST00000569293 1028 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 MIR4325-201ENST00000583049 90 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AL031775.1-201ENST00000607014 887 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AF246928.1-201ENST00000623768 87 ntBASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HDHD3Q9BSH5 ZNF833P-201ENST00000424938 1494 ntBASIC2.15□□□□□ -2.06
HDHD3Q9BSH5 MTND4P4-201ENST00000439033 1366 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNU1-100P-201ENST00000365255 165 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNU5E-5P-201ENST00000365379 116 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNU6-533P-201ENST00000384144 107 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL162578.1-201ENST00000406202 378 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNA5SP181-201ENST00000410246 98 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNA5SP492-201ENST00000411330 114 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RPLP0P7-201ENST00000416050 667 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 MTND2P18-201ENST00000419962 1030 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL356583.2-201ENST00000426536 280 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RPL7L1P10-201ENST00000427790 463 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 FCF1P1-201ENST00000432690 571 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 TAF9P1-201ENST00000445421 515 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 NANOGNBP1-201ENST00000448444 480 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL590365.1-201ENST00000450788 243 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC098826.2-201ENST00000452011 651 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 TAF9P2-201ENST00000454958 515 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC108059.3-201ENST00000456388 214 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AL031183.1-201ENST00000457667 207 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC087588.1-201ENST00000462203 316 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC126182.1-201ENST00000478134 357 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC112204.1-201ENST00000502591 103 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 FABP5P5-201ENST00000515537 406 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 RNU6-840P-201ENST00000517275 65 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC087373.1-201ENST00000524920 491 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AP006587.4-201ENST00000526053 529 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AP003181.2-201ENST00000528941 181 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 ARL2BPP2-201ENST00000550907 489 ntBASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.15□□□□□ -2.07
HDHD3Q9BSH5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms