Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU4-48P-201ENST00000365559 182 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RNU6-74P-201ENST00000384235 107 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RNA5SP111-201ENST00000411386 101 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 USP9YP6-201ENST00000413550 854 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC092809.3-201ENST00000415453 231 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 MTND1P1-201ENST00000445453 368 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC093392.2-201ENST00000450682 337 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RPL12P25-201ENST00000455592 494 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RPS7P7-201ENST00000463499 571 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 RNU6-914P-201ENST00000516749 109 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC068135.2-201ENST00000569293 1028 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC010653.1-201ENST00000571108 881 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC012507.3-201ENST00000603556 477 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC012557.2-201ENST00000605919 418 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AC093648.1-201ENST00000623546 606 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AP003122.6-201ENST00000623831 495 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 AL157786.1-207ENST00000627771 695 ntBASIC3.25□□□□□ -1.89
NR1H4Q96RI1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NR1H4Q96RI1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MFSD8-233ENST00000641482 4860 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RPL32P3-201ENST00000359025 275 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RNU6-61P-201ENST00000365528 109 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RNU6-606P-201ENST00000384721 111 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MIR887-201ENST00000401258 79 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL022722.2-201ENST00000402519 180 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RNU2-9P-201ENST00000410194 145 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL356095.1-201ENST00000417217 199 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL139281.1-201ENST00000422120 335 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MTND1P34-201ENST00000438556 671 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RPL26P9-201ENST00000457466 433 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC011825.1-201ENST00000484967 388 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RNU6-123P-201ENST00000516163 102 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 SNORD27.1-201ENST00000516319 72 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 RNA5SP503-201ENST00000517047 117 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC025884.1-201ENST00000556034 378 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC006557.5-201ENST00000603126 811 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AC010591.1-201ENST00000603941 649 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL355598.1-201ENST00000604169 202 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL591034.3-201ENST00000605511 685 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL627309.6-201ENST00000606857 840 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 DUSP12P1-201ENST00000612874 516 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 uc_338.11-201ENST00000619132 160 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MIR6758-201ENST00000620653 63 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MIR6500-201ENST00000622700 86 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 AL359740.1-201ENST00000624340 592 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 MIR6830-201ENST00000636015 70 ntBASIC3.24□□□□□ -1.89
NR1H4Q96RI1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NR1H4Q96RI1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AL591704.1-201ENST00000432574 275 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC008264.1-201ENST00000447612 367 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 RPL37P25-201ENST00000507308 276 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 SAP18P1-201ENST00000512058 390 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC024619.4-201ENST00000580924 316 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms