Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC136601.2-201ENST00000604356 474 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC091946.2-201ENST00000606105 291 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AC093673.2-201ENST00000609674 331 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.77□□□□□ -2.13
CCDC42Q96M95 MTND1P37-201ENST00000636562 264 ntBASIC1.77□□□□□ -2.13
CCDC42Q96M95 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC42Q96M95 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC42Q96M95 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC42Q96M95 U8.2-201ENST00000363156 134 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 MIR634-201ENST00000385208 97 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 MCTS2P-201ENST00000394552 546 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 U6atac.2-201ENST00000408644 118 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 MTCO3P1-205ENST00000422088 832 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AL035407.1-201ENST00000429211 571 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 RPL30P4-201ENST00000429309 333 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AL590233.1-201ENST00000430017 456 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 VN1R10P-201ENST00000447106 875 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AL500527.1-201ENST00000448532 255 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 RPL21P134-201ENST00000453468 483 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC107032.1-201ENST00000485945 480 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 CBX3P7-201ENST00000532876 502 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 HSBP1P1-201ENST00000555205 166 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC068276.1-201ENST00000605793 379 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC008443.7-201ENST00000622195 246 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AP002791.1-201ENST00000623291 381 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 PISRT1-201ENST00000626175 531 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 MIR4275-201ENST00000636486 87 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AL590396.4-201ENST00000636779 956 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 MTND5P30-201ENST00000452896 1731 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
CCDC42Q96M95 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC42Q96M95 AC083799.1-201ENST00000366451 910 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RPL23AP29-201ENST00000397284 453 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RNU6-1140P-201ENST00000410517 106 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC007919.1-201ENST00000429380 217 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 GTF2IP7-202ENST00000436677 309 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RPL7P12-201ENST00000446719 750 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RPL23AP3-201ENST00000453844 468 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RPL12P25-201ENST00000455592 494 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RPS20P22-201ENST00000473700 357 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC104685.1-201ENST00000502445 371 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC42Q96M95 AF213884.2-201ENST00000510417 903 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC42Q96M95 VN1R9P-201ENST00000614184 867 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 AC013476.2-201ENST00000614456 459 ntBASIC1.75□□□□□ -2.13
CCDC42Q96M95 RNU6-1159P-201ENST00000362933 107 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 RNU4-42P-201ENST00000364738 142 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 Z98749.2-208ENST00000381646 500 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 POLHP1-201ENST00000411806 470 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 BX276092.3-201ENST00000424182 230 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 MTND4LP7-201ENST00000431728 294 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AL353689.1-201ENST00000438895 199 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC098831.1-201ENST00000440661 216 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 RPS20P20-201ENST00000460498 340 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 RPL7P18-201ENST00000478965 734 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 HMGB1P36-201ENST00000487709 576 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 BOLA3P3-201ENST00000505182 232 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC091860.1-201ENST00000505723 432 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AP000916.1-201ENST00000533869 835 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AL450270.1-201ENST00000606160 391 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AP000238.1-201ENST00000608759 426 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC104820.1-201ENST00000624183 307 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC110491.1-201ENST00000562191 2010 ntBASIC1.74□□□□□ -2.13
CCDC42Q96M95 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC42Q96M95 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC42Q96M95 MIR217-201ENST00000384817 110 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC42Q96M95 RPL7P27-201ENST00000403775 720 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms