Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 AC004062.1-201ENST00000509926 645 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNA5SP82-201ENST00000516707 92 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 SNRPGP16-201ENST00000533275 226 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TTC28Q96AY4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 U6.48-201ENST00000618523 106 ntBASIC0.98□□□□□ -2.25
TTC28Q96AY4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
TTC28Q96AY4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TTC28Q96AY4 RNU6-98P-201ENST00000384173 107 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 RFESDP1-201ENST00000422350 461 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 RPS15AP7-201ENST00000439294 405 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AL031659.1-201ENST00000447075 539 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 RPL21P39-201ENST00000463605 483 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 RPL21P93-201ENST00000480465 489 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC233702.1-201ENST00000482905 502 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC093591.1-201ENST00000491435 481 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 RPL37P25-201ENST00000507308 276 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC025755.1-201ENST00000521306 278 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 MIR4636-201ENST00000582271 80 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 ANAPC10P1-201ENST00000395991 556 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 RNU2-70P-201ENST00000410718 179 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 MTCYBP24-201ENST00000420387 1106 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 RPS24P6-201ENST00000452670 400 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 CDC42P4-201ENST00000510507 563 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AP004371.1-201ENST00000525240 214 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 OR10V3P-201ENST00000525712 725 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 MTCYBP41-201ENST00000528913 1123 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 HSPE1P20-201ENST00000538133 289 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 YWHAQP7-201ENST00000603536 658 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC006963.1-201ENST00000624003 1052 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 AL161722.3-201ENST00000605789 2983 ntBASIC0.97□□□□□ -2.25
TTC28Q96AY4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.97□□□□□ -2.25
TTC28Q96AY4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 NACAP2-201ENST00000318548 624 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 RNA5SP252-201ENST00000391131 119 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL356776.1-201ENST00000406574 447 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 HMGN2P30-201ENST00000423237 256 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 UBE2D3P2-201ENST00000424409 445 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL161651.1-201ENST00000440882 223 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 MTND3P24-201ENST00000506306 329 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 MTND2P26-201ENST00000528255 1029 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC073544.1-201ENST00000600110 1595 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 Y_RNA.142-201ENST00000363491 102 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 RNA5SP212-201ENST00000391223 107 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 MIR1468-201ENST00000410600 86 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC096533.1-201ENST00000411645 353 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC019070.1-201ENST00000415008 1024 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 RPS15AP40-201ENST00000419621 391 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC099677.1-201ENST00000420575 175 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 RPS26P21-201ENST00000475397 348 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC111193.1-201ENST00000504097 155 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC121758.2-201ENST00000553271 193 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 AC106791.2-201ENST00000604680 391 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 FAM157A-202ENST00000615155 405 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 U4.2-201ENST00000618561 85 ntBASIC0.96□□□□□ -2.26
TTC28Q96AY4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.96□□□□□ -2.26
TTC28Q96AY4 AL049737.1-201ENST00000413920 1403 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TTC28Q96AY4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TTC28Q96AY4 RNA5SP393-201ENST00000363423 117 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 SNORA2A-201ENST00000383885 135 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 Z75741.2-201ENST00000417272 1167 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 HSFY3P-201ENST00000444242 1191 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 RPS27P1-201ENST00000450552 247 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 RNA5SP310-201ENST00000459084 116 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 MTCYBP35-201ENST00000503630 1137 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC010625.1-201ENST00000511296 403 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 CIR1P1-201ENST00000524055 1133 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC091057.2-201ENST00000602594 792 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC012557.2-201ENST00000605919 418 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms