Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.81□□□□□ -1.96
RFT1Q96AA3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RFT1Q96AA3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
RFT1Q96AA3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.81□□□□□ -1.96
RFT1Q96AA3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RFT1Q96AA3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RFT1Q96AA3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL137003.2-201ENST00000606924 2538 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFT1Q96AA3 RNU6-517P-201ENST00000384362 110 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 Y_RNA.516-201ENST00000384541 124 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 Y_RNA.517-201ENST00000384551 106 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 RNU6-648P-201ENST00000410190 107 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 Y_RNA.598-201ENST00000410480 95 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 RNU2-16P-201ENST00000410712 136 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 UBE2V1P10-201ENST00000414685 269 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFT1Q96AA3 Z96811.1-201ENST00000445880 108 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC092798.1-201ENST00000458542 409 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 RNU7-23P-201ENST00000459465 62 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 MTCO2P29-201ENST00000465212 189 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 RN7SL432P-201ENST00000484057 298 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC107401.1-201ENST00000503426 685 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC138853.1-201ENST00000503549 823 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AP003181.2-201ENST00000528941 181 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 MIR4276-201ENST00000584832 70 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC087683.1-201ENST00000591187 441 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.6-201ENST00000603753 252 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.11-201ENST00000604059 253 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL136363.2-201ENST00000604173 851 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC008162.1-201ENST00000604718 254 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.1-201ENST00000604752 252 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.5-201ENST00000605253 252 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.12-201ENST00000605291 253 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.8-201ENST00000605353 252 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AL670379.7-201ENST00000605823 252 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC006338.1-201ENST00000618453 749 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
RFT1Q96AA3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFT1Q96AA3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC008669.1-201ENST00000565823 2178 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RNU4-91P-201ENST00000364778 135 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RNU6-348P-201ENST00000384386 107 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RNU2-36P-201ENST00000410361 191 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL663109.1-201ENST00000411498 844 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RAC1P6-201ENST00000423911 575 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC104651.1-201ENST00000427559 735 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 ELOCP14-201ENST00000428070 331 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC018644.1-201ENST00000429934 551 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 HMGB3P12-201ENST00000438745 556 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 ELOCP7-201ENST00000439968 331 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 PGBD4P3-201ENST00000440731 581 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 ST13P20-201ENST00000447996 1065 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL133547.1-201ENST00000448546 220 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RBMY2UP-201ENST00000453474 324 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RN7SL542P-201ENST00000467147 294 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 MTND2P33-201ENST00000506452 1031 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RNA5SP290-201ENST00000517133 127 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 PAICSP4-201ENST00000517543 1253 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC011979.2-201ENST00000527568 352 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC128657.1-201ENST00000549459 145 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AP001094.1-201ENST00000579805 193 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 HMGN1P30-201ENST00000589286 268 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC012119.1-201ENST00000603184 222 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC098826.3-201ENST00000603823 466 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL161798.1-201ENST00000604630 131 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC087752.4-201ENST00000605911 462 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 Z99129.1-201ENST00000612510 255 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AC039056.2-201ENST00000622261 511 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL603839.4-201ENST00000624658 1005 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms