Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC013244.3-201ENST00000605614 388 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC018755.4-201ENST00000619715 454 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL356596.1-201ENST00000624230 379 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 SNORA51.11-201ENST00000384442 131 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 MIR613-201ENST00000385248 95 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPL23AP29-201ENST00000397284 453 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPS3AP24-201ENST00000407896 734 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL008987.1-201ENST00000415528 237 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC083875.1-201ENST00000419509 405 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC011233.1-201ENST00000422812 283 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 USP9YP11-201ENST00000427537 717 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 MTCYBP45-201ENST00000435243 565 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 HMGN2P20-201ENST00000437531 273 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL353691.1-201ENST00000451332 387 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 USP9YP34-201ENST00000453983 808 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPS29P20-201ENST00000489592 171 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 HSPE1P18-201ENST00000517602 280 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC105185.1-201ENST00000518705 535 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 BNIP3P26-201ENST00000600827 554 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AP001350.1-201ENST00000601906 1524 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 OR4G11P-202ENST00000642116 1414 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 GDI2P1-201ENST00000429312 1336 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 RNU6-289P-201ENST00000364093 107 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 RNU6-173P-201ENST00000364215 104 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AL356421.1-201ENST00000403255 413 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AP000567.1-201ENST00000406413 156 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1140P-201ENST00000410517 106 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC244098.2-201ENST00000422068 99 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 OR6C5P-201ENST00000452388 923 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 RPL21P39-201ENST00000463605 483 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 MTAPP1-201ENST00000489154 819 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 MTCYBP35-201ENST00000503630 1137 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC004062.1-201ENST00000509926 645 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 Y_RNA.717-201ENST00000517106 92 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 HSPA8P13-201ENST00000523715 472 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 OR4P1P-201ENST00000530808 1136 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AL158211.1-201ENST00000566763 763 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AL592221.1-201ENST00000605266 382 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AC105129.3-201ENST00000605455 485 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 AL031667.3-201ENST00000620124 655 ntBASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SHROOM3Q8TF72 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AL391994.1-201ENST00000254724 282 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU6-1078P-201ENST00000364522 103 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 ANAPC10P1-201ENST00000395991 556 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 TPMTP2-201ENST00000414372 726 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 OFD1P18Y-201ENST00000420889 959 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 XKRYP1-201ENST00000423438 492 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 XKRYP2-201ENST00000432915 492 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RPS15AP7-201ENST00000439294 405 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 RNU7-125P-201ENST00000458760 62 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC092757.1-201ENST00000467293 467 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AP000852.1-201ENST00000472460 573 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 SNORA48.10-201ENST00000516965 160 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AP003461.1-201ENST00000528866 78 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC109635.4-202ENST00000531666 412 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC023538.1-201ENST00000534576 736 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 ELOCP32-201ENST00000548625 324 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC018638.7-201ENST00000605836 1114 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 MIR6504-201ENST00000613520 61 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC108479.2-201ENST00000617314 601 ntBASIC1.96□□□□□ -2.1
SHROOM3Q8TF72 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms