Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
DNAAF1Q8NEP3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
DNAAF1Q8NEP3 ZNF826P-207ENST00000622273 1910 ntBASIC3.28□□□□□ -1.88
DNAAF1Q8NEP3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DNAAF1Q8NEP3 RLIMP1-201ENST00000339626 1680 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNY3P3-201ENST00000363816 102 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 SNORA4.3-201ENST00000365564 137 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 SNORA70C-201ENST00000384538 135 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 SNORA11B-201ENST00000408175 129 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC080125.1-201ENST00000414888 684 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AL160275.3-201ENST00000423876 471 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 MTND1P2-201ENST00000430604 821 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AL591704.1-201ENST00000432574 275 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 DPPA3P1-201ENST00000448050 469 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 TPT1P12-201ENST00000448968 492 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RPS7P7-201ENST00000463499 571 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RPL7P19-201ENST00000469948 618 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC012181.1-201ENST00000479895 423 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 PHBP14-201ENST00000512887 367 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNA5SP291-201ENST00000517222 105 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 SUB1P1-201ENST00000524415 382 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 MIR4801-201ENST00000582704 82 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 BNIP3P9-201ENST00000603714 553 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 MIR6867-201ENST00000610636 67 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 MIR6830-201ENST00000636015 70 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 Z99571.1-201ENST00000636677 394 ntBASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
DNAAF1Q8NEP3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-217P-201ENST00000384164 104 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 CALM2P2-201ENST00000428512 440 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC122718.1-201ENST00000439448 744 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC114755.5-201ENST00000447760 831 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 CECR9-201ENST00000453421 199 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RNU7-180P-201ENST00000459240 63 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 FAM133DP-201ENST00000464802 691 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RPL21P8-201ENST00000465083 535 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC069439.1-201ENST00000494739 167 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC009901.1-201ENST00000506703 541 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC053481.4-201ENST00000583164 216 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 MIR4424-201ENST00000585257 86 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 HSPE1P7-201ENST00000604681 321 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 RBM11P1-201ENST00000604951 799 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AL670379.4-201ENST00000605279 254 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 AC002553.4-201ENST00000616896 331 ntBASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNAAF1Q8NEP3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.25□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
DNAAF1Q8NEP3 SNORA62-201ENST00000365493 153 ntBASIC3.25□□□□□ -1.89
DNAAF1Q8NEP3 SNORA56-201ENST00000383966 129 ntBASIC3.25□□□□□ -1.89
DNAAF1Q8NEP3 RNU6-116P-201ENST00000384042 109 ntBASIC3.25□□□□□ -1.89
DNAAF1Q8NEP3 RPL21P65-201ENST00000406094 466 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms