Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC114797.1-201ENST00000514003 728 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC119751.5-201ENST00000514077 770 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC100870.1-201ENST00000522035 505 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC093012.1-202ENST00000549403 582 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 MIR3609-201ENST00000582661 80 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 MIR4293-201ENST00000584305 78 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC006504.3-201ENST00000586818 523 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC012065.4-201ENST00000602445 679 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 Z99497.2-201ENST00000603634 310 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AL359999.1-201ENST00000604513 294 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC008277.2-201ENST00000605196 797 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC068057.2-201ENST00000624047 895 ntBASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
C9orf40Q8IXQ3 AC108206.1-201ENST00000570186 4159 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL049641.1-201ENST00000441055 1948 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNY4P16-201ENST00000364768 94 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNY3P13-201ENST00000365542 102 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-741P-201ENST00000383889 107 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNU1-101P-201ENST00000391171 127 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 SNORA26.8-201ENST00000391306 124 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL359634.1-202ENST00000404721 284 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 FCF1P10-201ENST00000407590 479 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 Z85995.1-201ENST00000415547 335 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 NPM1P11-201ENST00000417106 855 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC007919.1-201ENST00000429380 217 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-420P-201ENST00000458780 107 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC116337.2-201ENST00000477662 156 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL135752.1-201ENST00000479477 471 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC004924.1-201ENST00000480160 781 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC118465.1-201ENST00000513820 1271 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 SNORD59.2-201ENST00000516873 68 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC107934.1-201ENST00000522215 217 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AP002748.2-201ENST00000528671 348 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 MIR548AB-201ENST00000584917 84 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AL359198.2-201ENST00000611836 194 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 uc_338.12-201ENST00000616344 181 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AC009878.1-201ENST00000621819 340 ntBASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.5□□□□□ -2.01
C9orf40Q8IXQ3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 AC062016.1-201ENST00000355719 319 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 RNU4-21P-201ENST00000362802 126 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 RNA5SP252-201ENST00000391131 119 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 AL512633.1-201ENST00000399931 655 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 RNU2-52P-201ENST00000410680 190 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 CYCSP46-201ENST00000423569 204 ntBASIC2.49□□□□□ -2.01
C9orf40Q8IXQ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms