Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT40Q6A162 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT40Q6A162 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
KRT40Q6A162 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT40Q6A162 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
KRT40Q6A162 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT40Q6A162 RNU6-263P-201ENST00000363811 107 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 Y_RNA.373-201ENST00000365600 103 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 Y_RNA.378-201ENST00000365652 113 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRT40Q6A162 Y_RNA.431-201ENST00000384086 102 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 MT-TC-201ENST00000387405 66 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 RNU6-821P-201ENST00000390995 107 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 RNU6-754P-201ENST00000391166 107 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT40Q6A162 NCOR1P3-201ENST00000420479 303 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AC005517.2-201ENST00000424673 553 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AL353729.1-201ENST00000425044 720 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AP001486.1-201ENST00000463339 476 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AL049873.1-201ENST00000480540 376 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AC091885.1-201ENST00000506658 268 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT40Q6A162 PTP4A1P6-201ENST00000531034 478 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT40Q6A162 MIR3942-201ENST00000585264 109 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AL669831.4-202ENST00000590817 238 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 AC093838.1-201ENST00000613014 469 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT40Q6A162 AC025034.2-201ENST00000623264 286 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 MAPK10-372ENST00000641954 3413 ntBASIC4.27□□□□□ -1.73
KRT40Q6A162 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT40Q6A162 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
KRT40Q6A162 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
KRT40Q6A162 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC073343.1-201ENST00000328239 651 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RNU6-179P-201ENST00000363350 107 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RNU6-432P-201ENST00000384196 109 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 Y_RNA.576-201ENST00000384781 102 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AL359634.1-202ENST00000404721 284 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RNU4-14P-201ENST00000410858 122 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 RNU6-1208P-201ENST00000459588 107 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AL133162.1-201ENST00000463228 453 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RPS29P2-201ENST00000479278 136 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC083904.1-201ENST00000487828 231 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RNU6-1092P-201ENST00000516955 87 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 RN7SKP57-201ENST00000517248 293 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC008489.1-201ENST00000524271 483 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC135001.1-201ENST00000544546 283 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 CR383656.7-201ENST00000548164 174 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC093249.1-201ENST00000567049 203 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AC092807.2-201ENST00000609367 243 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 AC004825.2-201ENST00000616634 455 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT40Q6A162 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 PRO1804-201ENST00000623780 2050 ntBASIC4.26□□□□□ -1.73
KRT40Q6A162 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT40Q6A162 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRT40Q6A162 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
KRT40Q6A162 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.25□□□□□ -1.73
KRT40Q6A162 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
KRT40Q6A162 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
KRT40Q6A162 Y_RNA.387-201ENST00000383918 102 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 RNU6-637P-201ENST00000384050 107 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 SNORD116-29-201ENST00000384516 83 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 MIR128-1-201ENST00000384921 82 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KRT40Q6A162 AL109755.1-201ENST00000401791 649 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.25□□□□□ -1.73
KRT40Q6A162 OR6C66P-201ENST00000414917 930 ntBASIC4.25□□□□□ -1.73
KRT40Q6A162 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms