Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 PPP1R2P5-201ENST00000457256 603 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 RNU6-333P-201ENST00000459117 107 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 RPL21P129-201ENST00000491732 478 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 RNU6-579P-201ENST00000516879 102 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 RNA5SP143-201ENST00000516936 115 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC026403.1-201ENST00000518938 295 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 RPL7P20-201ENST00000520308 745 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC008011.1-201ENST00000545989 227 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC011611.1-201ENST00000552179 197 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC005498.1-201ENST00000592125 465 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 SNORA51-201ENST00000606420 132 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 uc_338.34-201ENST00000617467 174 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AL732372.2-225ENST00000642124 456 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 CEP170P1-201ENST00000502249 4587 ntBASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC178Q5BJE1 AC006504.1-201ENST00000562493 3666 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 USP8P1-201ENST00000494673 3183 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RPS4XP5-202ENST00000449995 1334 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.166-201ENST00000363730 102 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RNU6-960P-201ENST00000364056 120 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL359634.1-202ENST00000404721 284 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 TXNP7-201ENST00000406296 293 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MTND3P8-201ENST00000412909 339 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RPL30P2-201ENST00000414021 291 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RPL21P109-201ENST00000422213 475 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 GAPDHP27-201ENST00000447427 1020 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC106707.2-201ENST00000484182 374 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RBBP4P6-201ENST00000508098 202 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.665-201ENST00000516177 98 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RNU6-273P-201ENST00000516937 96 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 RNU4-60P-201ENST00000517239 135 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MTND4P7-201ENST00000523876 130 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC026464.5-201ENST00000562497 722 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MIR4742-201ENST00000581069 85 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC044792.1-201ENST00000593294 196 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.6-201ENST00000603753 252 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.11-201ENST00000604059 253 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC008162.1-201ENST00000604718 254 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.1-201ENST00000604752 252 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.5-201ENST00000605253 252 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.4-201ENST00000605279 254 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.12-201ENST00000605291 253 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.8-201ENST00000605353 252 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL670379.7-201ENST00000605823 252 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MIR7851-201ENST00000610611 160 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AC135507.2-201ENST00000612443 309 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL390240.1-201ENST00000612950 384 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MIR6130-201ENST00000619419 109 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 AL034408.1-202ENST00000636088 415 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 MTND5P3-201ENST00000438536 1800 ntBASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC178Q5BJE1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 Y_RNA.67-201ENST00000362870 100 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 SMIM11P1-201ENST00000369586 178 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RNU6-946P-201ENST00000383878 107 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RNU6-1074P-201ENST00000383995 104 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RNU6-116P-201ENST00000384042 109 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 MIR514A2-201ENST00000385131 88 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 MIR514A3-201ENST00000385132 88 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 SYF2P2-201ENST00000417620 583 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AL645937.1-202ENST00000421799 937 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 MTCO3P46-201ENST00000425787 232 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC079780.1-201ENST00000428259 207 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 RN7SL93P-201ENST00000463035 293 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AL049830.2-201ENST00000480072 201 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC083904.1-201ENST00000487828 231 ntBASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC178Q5BJE1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms