Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP000567.1-201ENST00000406413 156 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AC009161.1-201ENST00000417306 376 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 ZNF863P-201ENST00000426746 417 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RPL23AP69-201ENST00000431134 458 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AL358472.1-201ENST00000431295 329 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 NOTCH2P1-201ENST00000443481 624 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 SCARNA18-201ENST00000459004 134 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-333P-201ENST00000459117 107 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RPL21P99-201ENST00000480369 423 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AC022690.1-201ENST00000526681 550 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AC136601.2-201ENST00000604356 474 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 BNIP3P10-201ENST00000605360 577 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 MIR486-1-201ENST00000612171 68 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 RNA5SP295-201ENST00000362655 121 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-82P-201ENST00000363970 107 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-434P-201ENST00000384376 107 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 MIR514A2-201ENST00000385131 88 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 MIR514A3-201ENST00000385132 88 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 MIR325-201ENST00000385260 98 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 RPS4XP3-201ENST00000398541 413 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 CEACAMP4-201ENST00000457676 421 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC012181.1-201ENST00000479895 423 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC128687.2-201ENST00000609657 566 ntBASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC144BQ3MJ40 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-395P-201ENST00000365662 106 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-393P-201ENST00000384475 107 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-1127P-201ENST00000384580 107 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MIR30B-201ENST00000384850 88 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MT-TL1-201ENST00000386347 75 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RNU4-26P-201ENST00000410270 107 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RNU2-68P-201ENST00000410878 191 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC063979.1-201ENST00000415539 377 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 YME1L1P1-201ENST00000429435 297 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC087650.1-201ENST00000431445 468 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 RPL29P14-201ENST00000495837 428 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 BTF3L4P4-201ENST00000506381 449 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC018710.1-201ENST00000506509 158 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MIR2114-201ENST00000516645 80 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 AC025627.2-201ENST00000576220 160 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MIR3944-201ENST00000581277 108 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 SNORA51-201ENST00000606420 132 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 FP236240.3-201ENST00000623061 327 ntBASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC144BQ3MJ40 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 SNORD46.1-201ENST00000364139 104 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 SNORA4.3-201ENST00000365564 137 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-140P-201ENST00000384566 108 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AL139039.1-201ENST00000401900 692 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RN7SKP156-201ENST00000410308 342 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC009237.5-201ENST00000414271 501 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC138393.2-201ENST00000414742 246 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RPL30P16-201ENST00000419341 429 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms