Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC018630.2-201ENST00000534866 2403 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC091812.1-201ENST00000432235 1948 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 RPS15AP40-201ENST00000419621 391 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMGXB3Q12766 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 RPL31P20-201ENST00000449593 360 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC010285.1-201ENST00000470580 392 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 CYCSP26-201ENST00000534107 320 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 MTND4LP24-201ENST00000572277 291 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 MIR8087-201ENST00000612745 78 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGXB3Q12766 AC006963.1-201ENST00000624003 1052 ntBASIC1.56□□□□□ -2.16
HMGXB3Q12766 Y_RNA.274-201ENST00000364714 101 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMGXB3Q12766 Y_RNA.390-201ENST00000383932 102 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGXB3Q12766 MTCYBP29-201ENST00000436327 1006 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGXB3Q12766 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.55□□□□□ -2.16
HMGXB3Q12766 HMGB1P22-201ENST00000505315 124 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 PCNAP1-201ENST00000505363 709 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 AC114786.4-201ENST00000508771 728 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 AC114797.1-201ENST00000514003 728 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 MIR6076-201ENST00000617521 113 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 AC010487.4-201ENST00000637027 61 ntBASIC1.55□□□□□ -2.16
HMGXB3Q12766 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 MTND4P31-201ENST00000425607 1343 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 U8.3-201ENST00000363321 132 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 MIR936-201ENST00000401264 98 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 MIR1250-201ENST00000408098 113 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 MTCYBP24-201ENST00000420387 1106 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 SYPL1P1-201ENST00000473622 768 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 AC025768.1-201ENST00000510057 267 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 MRPS33P3-201ENST00000513456 322 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 LRRC34P2-201ENST00000514850 553 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGXB3Q12766 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 AP004247.1-201ENST00000531556 1289 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 AL133370.2-201ENST00000619934 439 ntBASIC1.54□□□□□ -2.16
HMGXB3Q12766 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGXB3Q12766 SNORD114-23-201ENST00000363536 72 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 RNU6-17P-201ENST00000384245 107 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 RNU6-18P-201ENST00000384527 107 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 PTGES3P2-201ENST00000407942 482 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 OR6C66P-201ENST00000414917 930 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 RPL27AP8-201ENST00000424277 446 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 AC234064.1-201ENST00000436312 247 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMGXB3Q12766 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 COX6CP3-201ENST00000580869 223 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 AL050343.2-201ENST00000607338 280 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGXB3Q12766 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.53□□□□□ -2.16
HMGXB3Q12766 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 AC022447.3-201ENST00000506865 495 ntBASIC1.52□□□□□ -2.17
HMGXB3Q12766 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 AC087465.1-201ENST00000560574 245 ntBASIC1.52□□□□□ -2.17
HMGXB3Q12766 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGXB3Q12766 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGXB3Q12766 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGXB3Q12766 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGXB3Q12766 RNU6-670P-201ENST00000364312 104 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 MIR17-201ENST00000385012 84 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 RPL21P32-201ENST00000419877 477 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC004062.1-201ENST00000509926 645 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 OR10V3P-201ENST00000525712 725 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 MTND2P26-201ENST00000528255 1029 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.51□□□□□ -2.17
HMGXB3Q12766 DUXAP11-201ENST00000603858 526 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC103810.9-201ENST00000606688 112 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC008669.1-201ENST00000565823 2178 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 AC008163.1-202ENST00000636004 2889 ntBASIC1.51□□□□□ -2.17
HMGXB3Q12766 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGXB3Q12766 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMGXB3Q12766 NUP35P2-201ENST00000416748 943 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 AC244636.1-201ENST00000421152 228 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 UBE2D3P2-201ENST00000424409 445 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 AL357134.1-201ENST00000445848 426 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 RPS29P28-201ENST00000446439 141 ntBASIC1.5□□□□□ -2.17
HMGXB3Q12766 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms