Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MTND1P37-201ENST00000636562 264 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AC011477.1-204ENST00000623416 1325 ntBASIC1.81□□□□□ -2.12
ACTBP60709 AL356473.1-201ENST00000406203 1408 ntBASIC1.81□□□□□ -2.12
ACTBP60709 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ACTBP60709 AC010889.1-201ENST00000566193 2666 ntBASIC1.8□□□□□ -2.12
ACTBP60709 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ACTBP60709 RNA5SP126-201ENST00000365092 109 ntBASIC1.8□□□□□ -2.12
ACTBP60709 RNU6-140P-201ENST00000384566 108 ntBASIC1.8□□□□□ -2.12
ACTBP60709 MIR221-201ENST00000385135 110 ntBASIC1.8□□□□□ -2.12
ACTBP60709 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
ACTBP60709 RNU4-53P-201ENST00000410828 140 ntBASIC1.8□□□□□ -2.12
ACTBP60709 TPMTP3-201ENST00000411928 735 ntBASIC1.8□□□□□ -2.12
ACTBP60709 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ACTBP60709 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.8□□□□□ -2.12
ACTBP60709 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.8□□□□□ -2.12
ACTBP60709 XKRYP1-201ENST00000423438 492 ntBASIC1.8□□□□□ -2.12
ACTBP60709 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC008850.1-201ENST00000427546 362 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.8□□□□□ -2.12
ACTBP60709 MTCO1P3-201ENST00000429327 192 ntBASIC1.8□□□□□ -2.12
ACTBP60709 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.8□□□□□ -2.12
ACTBP60709 XKRYP2-201ENST00000432915 492 ntBASIC1.8□□□□□ -2.12
ACTBP60709 UBE2D3P1-201ENST00000436669 444 ntBASIC1.8□□□□□ -2.12
ACTBP60709 RPL7P36-201ENST00000444633 681 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC079776.3-201ENST00000450665 370 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.8□□□□□ -2.12
ACTBP60709 LTV1P1-201ENST00000510683 1237 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.8□□□□□ -2.12
ACTBP60709 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.8□□□□□ -2.12
ACTBP60709 HIGD1AP17-201ENST00000554576 276 ntBASIC1.8□□□□□ -2.12
ACTBP60709 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.8□□□□□ -2.12
ACTBP60709 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.8□□□□□ -2.12
ACTBP60709 AC105245.1-201ENST00000581934 244 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC005776.1-201ENST00000603164 290 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC008121.1-201ENST00000603244 268 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC011451.2-201ENST00000604303 598 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC136601.2-201ENST00000604356 474 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AL589743.7-201ENST00000612637 233 ntBASIC1.8□□□□□ -2.12
ACTBP60709 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.8□□□□□ -2.12
ACTBP60709 AC109454.4-201ENST00000623411 649 ntBASIC1.8□□□□□ -2.12
ACTBP60709 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ACTBP60709 ELF2P3-201ENST00000445099 1506 ntBASIC1.8□□□□□ -2.12
ACTBP60709 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
ACTBP60709 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACTBP60709 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACTBP60709 Y_RNA.234-201ENST00000364409 97 ntBASIC1.79□□□□□ -2.12
ACTBP60709 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ACTBP60709 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ACTBP60709 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
ACTBP60709 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.79□□□□□ -2.12
ACTBP60709 RPS24P7-201ENST00000416921 246 ntBASIC1.79□□□□□ -2.12
ACTBP60709 ZNF90P2-204ENST00000419323 1075 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.79□□□□□ -2.12
ACTBP60709 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.79□□□□□ -2.12
ACTBP60709 BX276092.3-201ENST00000424182 230 ntBASIC1.79□□□□□ -2.12
ACTBP60709 ZYG11AP1-201ENST00000430329 837 ntBASIC1.79□□□□□ -2.12
ACTBP60709 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.79□□□□□ -2.12
ACTBP60709 GTF2IP7-202ENST00000436677 309 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AL353689.1-201ENST00000438895 199 ntBASIC1.79□□□□□ -2.12
ACTBP60709 DNAJC19P4-201ENST00000440115 345 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.79□□□□□ -2.12
ACTBP60709 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
ACTBP60709 MTCYBP16-201ENST00000509187 1129 ntBASIC1.79□□□□□ -2.12
ACTBP60709 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.79□□□□□ -2.12
ACTBP60709 SCARNA16.3-201ENST00000516595 184 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
ACTBP60709 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.79□□□□□ -2.12
ACTBP60709 AL359212.1-201ENST00000556608 614 ntBASIC1.79□□□□□ -2.12
ACTBP60709 MIR3126-201ENST00000577443 74 ntBASIC1.79□□□□□ -2.12
ACTBP60709 MTND4LP5-201ENST00000605152 292 ntBASIC1.79□□□□□ -2.12
ACTBP60709 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AC068880.4-201ENST00000623082 495 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AC107982.1-201ENST00000507171 1300 ntBASIC1.79□□□□□ -2.12
ACTBP60709 MTCO1P9-201ENST00000505577 1534 ntBASIC1.79□□□□□ -2.12
ACTBP60709 AC006020.1-201ENST00000420179 1854 ntBASIC1.79□□□□□ -2.12
ACTBP60709 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.78□□□□□ -2.12
ACTBP60709 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ACTBP60709 RNU6-28P-201ENST00000362378 107 ntBASIC1.78□□□□□ -2.12
ACTBP60709 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
ACTBP60709 RNU6-343P-201ENST00000364709 104 ntBASIC1.78□□□□□ -2.12
ACTBP60709 RNU6-359P-201ENST00000365466 108 ntBASIC1.78□□□□□ -2.12
ACTBP60709 RNU1-73P-201ENST00000383971 164 ntBASIC1.78□□□□□ -2.12
ACTBP60709 BTF3P7-201ENST00000407097 488 ntBASIC1.78□□□□□ -2.12
ACTBP60709 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ACTBP60709 RPL17P12-201ENST00000413391 526 ntBASIC1.78□□□□□ -2.12
ACTBP60709 TPMTP2-201ENST00000414372 726 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL109913.1-201ENST00000421173 514 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL139421.1-201ENST00000423010 169 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL451074.3-201ENST00000437709 472 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.78□□□□□ -2.12
ACTBP60709 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
ACTBP60709 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.78□□□□□ -2.12
ACTBP60709 AL591719.1-201ENST00000444669 744 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL118520.1-201ENST00000450770 291 ntBASIC1.78□□□□□ -2.12
ACTBP60709 ATG12P2-201ENST00000456830 416 ntBASIC1.78□□□□□ -2.12
ACTBP60709 RPS20P20-201ENST00000460498 340 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL121769.1-201ENST00000469473 401 ntBASIC1.78□□□□□ -2.12
ACTBP60709 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AC093801.2-201ENST00000503966 1050 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms