Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL355810.1-201ENST00000614629 552 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AL031601.2-202ENST00000622650 282 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN1P58418 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN1P58418 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 KPNA2P1-201ENST00000458289 1591 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN1P58418 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLRN1P58418 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.75□□□□□ -1.81
CLRN1P58418 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLRN1P58418 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 RNA5SP443-201ENST00000363083 132 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 SNORA22B-201ENST00000383876 138 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 RNU6-214P-201ENST00000384130 107 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 RNU4-25P-201ENST00000410569 230 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.75□□□□□ -1.81
CLRN1P58418 EI24P1-201ENST00000416584 867 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.75□□□□□ -1.81
CLRN1P58418 PMCHL1-202ENST00000423102 261 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.75□□□□□ -1.81
CLRN1P58418 HIGD1AP11-201ENST00000438361 280 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC011276.1-201ENST00000469688 323 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 RN7SL459P-201ENST00000481078 302 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC026801.1-201ENST00000497178 464 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 AL359273.1-201ENST00000510918 627 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 SCARNA15.2-201ENST00000516409 127 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 RNA5SP49-201ENST00000516450 115 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 RNU6-1256P-201ENST00000516539 103 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 HIGD1AP5-201ENST00000529959 259 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 MIR3921-201ENST00000577308 85 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 MIR4277-201ENST00000578298 84 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.75□□□□□ -1.81
CLRN1P58418 AL161798.1-201ENST00000604630 131 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AP001836.1-201ENST00000604675 523 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AL355802.3-201ENST00000607571 545 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC107294.1-201ENST00000609524 467 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 FAM27D1-201ENST00000612308 341 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 AC133104.2-201ENST00000615272 193 ntBASIC3.75□□□□□ -1.81
CLRN1P58418 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.75□□□□□ -1.81
CLRN1P58418 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.75□□□□□ -1.81
CLRN1P58418 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.75□□□□□ -1.81
CLRN1P58418 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.75□□□□□ -1.81
CLRN1P58418 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLRN1P58418 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN1P58418 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 RNA5SP388-201ENST00000362584 119 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RNA5SP509-201ENST00000364577 119 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 Y_RNA.473-201ENST00000384333 102 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 USP9YP7-201ENST00000436723 430 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RPS24P13-201ENST00000442520 397 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN1P58418 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 USP9YP32-201ENST00000452432 430 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 MIR2053-201ENST00000459295 91 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RN7SL585P-201ENST00000470538 280 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.74□□□□□ -1.81
CLRN1P58418 AF213884.1-201ENST00000488102 463 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN1P58418 AC096745.1-201ENST00000509945 370 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AC092436.3-201ENST00000511788 257 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RNU1-54P-201ENST00000517181 120 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 RNU6-1315P-201ENST00000517187 99 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.74□□□□□ -1.81
CLRN1P58418 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN1P58418 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.74□□□□□ -1.81
CLRN1P58418 AC100830.2-201ENST00000581636 240 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 MIR5096-201ENST00000583713 70 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN1P58418 NUTF2P8-201ENST00000604593 363 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AP000654.2-201ENST00000605633 586 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 AC007390.2-201ENST00000606229 3803 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 PISRT1.1-201ENST00000616930 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms