Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC018926.1-201ENST00000616335 435 ntBASIC1.94□□□□□ -2.1
RAB38P57729 AC019226.1-201ENST00000625666 515 ntBASIC1.94□□□□□ -2.1
RAB38P57729 AC010889.1-201ENST00000566193 2666 ntBASIC1.94□□□□□ -2.1
RAB38P57729 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB38P57729 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB38P57729 CKAP2P1-201ENST00000555477 2049 ntBASIC1.93□□□□□ -2.1
RAB38P57729 RNU6-114P-201ENST00000384704 105 ntBASIC1.93□□□□□ -2.1
RAB38P57729 RNU6-253P-201ENST00000384730 105 ntBASIC1.93□□□□□ -2.1
RAB38P57729 RNU6-754P-201ENST00000391166 107 ntBASIC1.93□□□□□ -2.1
RAB38P57729 TXNP7-201ENST00000406296 293 ntBASIC1.93□□□□□ -2.1
RAB38P57729 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB38P57729 USP9YP21-201ENST00000420603 432 ntBASIC1.93□□□□□ -2.1
RAB38P57729 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 AC007560.1-201ENST00000426912 237 ntBASIC1.93□□□□□ -2.1
RAB38P57729 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 MTATP6P7-201ENST00000453315 681 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.93□□□□□ -2.1
RAB38P57729 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB38P57729 AL160314.1-201ENST00000490836 438 ntBASIC1.93□□□□□ -2.1
RAB38P57729 RPS29P21-201ENST00000496272 170 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AC008427.1-201ENST00000503102 655 ntBASIC1.93□□□□□ -2.1
RAB38P57729 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 RNU1-41P-201ENST00000516161 162 ntBASIC1.93□□□□□ -2.1
RAB38P57729 RNU1-48P-201ENST00000516400 162 ntBASIC1.93□□□□□ -2.1
RAB38P57729 HMGN1P28-201ENST00000521340 364 ntBASIC1.93□□□□□ -2.1
RAB38P57729 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB38P57729 IGKV3-31-201ENST00000523109 329 ntBASIC1.93□□□□□ -2.1
RAB38P57729 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RAB38P57729 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB38P57729 AC010186.2-204ENST00000537668 439 ntBASIC1.93□□□□□ -2.1
RAB38P57729 MIR5571-201ENST00000577998 113 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AC126365.2-201ENST00000580630 379 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AL353997.4-201ENST00000586196 166 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AL357094.1-201ENST00000603845 844 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AC103710.1-201ENST00000610003 901 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AL589743.7-201ENST00000612637 233 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.93□□□□□ -2.1
RAB38P57729 AC231657.1-201ENST00000624313 397 ntBASIC1.93□□□□□ -2.1
RAB38P57729 AP003485.1-201ENST00000625093 753 ntBASIC1.93□□□□□ -2.1
RAB38P57729 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RAB38P57729 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
RAB38P57729 AC110491.1-201ENST00000562191 2010 ntBASIC1.93□□□□□ -2.1
RAB38P57729 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
RAB38P57729 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
RAB38P57729 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
RAB38P57729 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
RAB38P57729 MIR218-1-201ENST00000384999 110 ntBASIC1.92□□□□□ -2.1
RAB38P57729 RNU2-72P-201ENST00000411175 163 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.92□□□□□ -2.1
RAB38P57729 AL109913.1-201ENST00000421173 514 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB38P57729 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.92□□□□□ -2.1
RAB38P57729 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC069528.1-202ENST00000482888 637 ntBASIC1.92□□□□□ -2.1
RAB38P57729 RPS27AP10-201ENST00000496103 208 ntBASIC1.92□□□□□ -2.1
RAB38P57729 GTF2IP9-201ENST00000502460 301 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAB38P57729 SNORA31.6-201ENST00000516241 130 ntBASIC1.92□□□□□ -2.1
RAB38P57729 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AP005902.1-201ENST00000521358 186 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC118942.1-201ENST00000529674 1035 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB38P57729 AC009314.1-201ENST00000603871 304 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC007349.4-201ENST00000608114 532 ntBASIC1.92□□□□□ -2.1
RAB38P57729 AC239868.4-201ENST00000608318 671 ntBASIC1.92□□□□□ -2.1
RAB38P57729 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
RAB38P57729 TUG1_2.1-201ENST00000614234 87 ntBASIC1.92□□□□□ -2.1
RAB38P57729 SDR42E1P2-201ENST00000614861 481 ntBASIC1.92□□□□□ -2.1
RAB38P57729 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB38P57729 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RAB38P57729 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RAB38P57729 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.91□□□□□ -2.1
RAB38P57729 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB38P57729 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB38P57729 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.91□□□□□ -2.1
RAB38P57729 AL590084.2-201ENST00000401481 382 ntBASIC1.91□□□□□ -2.1
RAB38P57729 CCNG1P1-201ENST00000406783 885 ntBASIC1.91□□□□□ -2.1
RAB38P57729 NDUFS5P4-201ENST00000412983 318 ntBASIC1.91□□□□□ -2.1
RAB38P57729 CYCSP48-201ENST00000417124 323 ntBASIC1.91□□□□□ -2.1
RAB38P57729 MTND4P3-201ENST00000417829 541 ntBASIC1.91□□□□□ -2.1
RAB38P57729 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB38P57729 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.91□□□□□ -2.1
RAB38P57729 ZYG11AP1-201ENST00000430329 837 ntBASIC1.91□□□□□ -2.1
RAB38P57729 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
RAB38P57729 SNRPEP9-201ENST00000436794 238 ntBASIC1.91□□□□□ -2.1
RAB38P57729 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RAB38P57729 AC098831.1-201ENST00000440661 216 ntBASIC1.91□□□□□ -2.1
RAB38P57729 USP9YP8-201ENST00000441913 500 ntBASIC1.91□□□□□ -2.1
RAB38P57729 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.91□□□□□ -2.1
RAB38P57729 DYNLL1P5-201ENST00000467158 270 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms