Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR3921-201ENST00000577308 85 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC4P56524 MIR98-201ENST00000606724 119 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 AC126118.1-201ENST00000607744 628 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 AL161734.1-201ENST00000609720 557 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HDAC4P56524 AC006111.3-201ENST00000622137 383 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HDAC4P56524 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC4P56524 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.5□□□□□ -1.85
HDAC4P56524 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC4P56524 MTND5P7-201ENST00000413558 1798 ntBASIC3.5□□□□□ -1.85
HDAC4P56524 SDAD1P2-201ENST00000441308 2028 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 CR848007.1-201ENST00000442354 1699 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HDAC4P56524 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HDAC4P56524 Y_RNA.296-201ENST00000364930 108 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 SNORA20.2-201ENST00000383922 131 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 SAR1AP2-201ENST00000392696 594 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 TXNP7-201ENST00000406296 293 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC096664.2-201ENST00000411843 406 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 BX323014.1-201ENST00000412876 237 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 TMEM167AP1-201ENST00000423409 219 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 MTCO2P19-201ENST00000427513 598 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.49□□□□□ -1.85
HDAC4P56524 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.49□□□□□ -1.85
HDAC4P56524 RPS15AP9-201ENST00000439856 381 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.49□□□□□ -1.85
HDAC4P56524 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 AL049714.1-201ENST00000466686 347 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HDAC4P56524 RPS29P2-201ENST00000479278 136 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 HSPE1P6-201ENST00000479457 291 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 HMGB1P29-201ENST00000505659 499 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC011352.1-201ENST00000512300 793 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.49□□□□□ -1.85
HDAC4P56524 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HDAC4P56524 AP003072.2-201ENST00000527756 676 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 ARL2BPP2-201ENST00000550907 489 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.49□□□□□ -1.85
HDAC4P56524 AL606834.2-201ENST00000602954 668 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC004832.5-201ENST00000608677 401 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC107294.3-201ENST00000609211 526 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC009570.1-201ENST00000609599 745 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC092794.1-201ENST00000612734 582 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AL355365.1-201ENST00000616480 294 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 SNHG22-203ENST00000617833 660 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AL158209.2-201ENST00000619266 216 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 MIR7975-201ENST00000619350 68 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 AC017071.1-201ENST00000564407 2204 ntBASIC3.49□□□□□ -1.85
HDAC4P56524 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC4P56524 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.48□□□□□ -1.85
HDAC4P56524 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.48□□□□□ -1.85
HDAC4P56524 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 RNU1-70P-201ENST00000362618 164 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 RNA5SP50-201ENST00000363731 107 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 RNU1-33P-201ENST00000364249 162 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 U3.11-201ENST00000364476 212 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 SNORA36C-201ENST00000384289 132 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 RNU6-780P-201ENST00000391030 104 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 FCF1P9-201ENST00000412546 282 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.48□□□□□ -1.85
HDAC4P56524 AC008850.1-201ENST00000427546 362 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 RPL7L1P10-201ENST00000427790 463 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 AL159987.2-201ENST00000432754 307 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.48□□□□□ -1.85
HDAC4P56524 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.48□□□□□ -1.85
HDAC4P56524 AF213884.2-201ENST00000510417 903 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 SCARNA24.1-201ENST00000516465 137 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.48□□□□□ -1.85
HDAC4P56524 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.48□□□□□ -1.85
HDAC4P56524 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 AC087883.1-201ENST00000551882 391 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 AC027807.1-201ENST00000559921 996 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
HDAC4P56524 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.48□□□□□ -1.85
HDAC4P56524 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 MIR6863-201ENST00000636112 90 ntBASIC3.48□□□□□ -1.85
HDAC4P56524 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.48□□□□□ -1.85
HDAC4P56524 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDAC4P56524 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HDAC4P56524 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HDAC4P56524 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 OR4G2P-201ENST00000328113 903 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms