Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HSFY6P-201ENST00000445573 403 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AL360271.2-201ENST00000447710 161 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 ANP32BP2-201ENST00000454525 545 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.64□□□□□ -1.83
SUMO3P55854 HMGN1P12-201ENST00000499125 195 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.64□□□□□ -1.83
SUMO3P55854 AC079140.5-201ENST00000507882 310 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC008716.1-201ENST00000511084 513 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC046134.1-201ENST00000514454 666 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 RNU6-189P-201ENST00000516120 101 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 RNA5SP315-201ENST00000516340 116 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 RNA5SP312-201ENST00000517068 116 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 RNU6-1314P-201ENST00000517139 104 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 RPL7P20-201ENST00000520308 745 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
SUMO3P55854 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.64□□□□□ -1.83
SUMO3P55854 AMZ2P1-203ENST00000565833 850 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.64□□□□□ -1.83
SUMO3P55854 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.64□□□□□ -1.83
SUMO3P55854 UBE2V2P2-201ENST00000587677 504 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC012119.1-201ENST00000603184 222 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.64□□□□□ -1.83
SUMO3P55854 Z82243.1-201ENST00000609432 473 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 MIR6867-201ENST00000610636 67 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 DUSP12P1-201ENST00000612874 516 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 AC025253.1-201ENST00000613623 543 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 SNX18P1Y-201ENST00000616231 511 ntBASIC3.64□□□□□ -1.83
SUMO3P55854 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SUMO3P55854 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SUMO3P55854 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SUMO3P55854 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SUMO3P55854 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SUMO3P55854 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SUMO3P55854 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.63□□□□□ -1.83
SUMO3P55854 AP004289.2-201ENST00000444413 1457 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 CBX3P1-201ENST00000325243 554 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 Y_RNA.530-201ENST00000384587 101 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 RPL21P65-201ENST00000406094 466 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 RNU6-1025P-201ENST00000410629 104 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AL160275.2-201ENST00000412010 394 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AL645937.1-202ENST00000421799 937 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AL691449.1-201ENST00000426570 421 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.63□□□□□ -1.83
SUMO3P55854 NEK4P1-201ENST00000433383 879 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC073063.1-201ENST00000434352 607 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.63□□□□□ -1.83
SUMO3P55854 AC083863.1-201ENST00000438811 231 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.63□□□□□ -1.83
SUMO3P55854 AL590664.1-201ENST00000448065 339 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.63□□□□□ -1.83
SUMO3P55854 AC022493.1-201ENST00000492984 337 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 RPL31P61-201ENST00000496160 376 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC008628.2-201ENST00000502605 298 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 HIGD1AP13-201ENST00000509878 289 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 FAM206BP-201ENST00000510179 541 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.63□□□□□ -1.83
SUMO3P55854 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.63□□□□□ -1.83
SUMO3P55854 AC090115.3-201ENST00000553218 849 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.63□□□□□ -1.83
SUMO3P55854 AC008638.3-201ENST00000603341 463 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC092747.3-201ENST00000603769 301 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SUMO3P55854 AC093913.1-201ENST00000614178 329 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AL591424.2-201ENST00000617023 128 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC002076.2-201ENST00000617362 122 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AL136221.1-201ENST00000621449 509 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 AC103858.2-201ENST00000621471 543 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.63□□□□□ -1.83
SUMO3P55854 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.63□□□□□ -1.83
SUMO3P55854 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SUMO3P55854 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SUMO3P55854 MTND4P35-201ENST00000604257 1375 ntBASIC3.63□□□□□ -1.83
SUMO3P55854 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
SUMO3P55854 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SUMO3P55854 RNU6-845P-201ENST00000362578 103 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 RNU6-1035P-201ENST00000384477 107 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 RPL32P23-201ENST00000397237 405 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.62□□□□□ -1.83
SUMO3P55854 RPL35AP12-201ENST00000425362 338 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 MTCO3P46-201ENST00000425787 232 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 AC011742.1-201ENST00000431448 434 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.62□□□□□ -1.83
SUMO3P55854 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.62□□□□□ -1.83
SUMO3P55854 HMGB1P37-201ENST00000439613 609 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 RPL7P12-201ENST00000446719 750 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 RPL21P11-201ENST00000461458 483 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 DYNLL1P5-201ENST00000467158 270 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.62□□□□□ -1.83
SUMO3P55854 AC006445.2-201ENST00000510061 472 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 MTCO1P35-201ENST00000515270 228 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms