Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC108938.1-201ENST00000451204 136 ntBASIC2.47□□□□□ -2.01
LIM2P55344 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
LIM2P55344 MTND1P12-201ENST00000455231 147 ntBASIC2.47□□□□□ -2.01
LIM2P55344 SNRPFP4-201ENST00000456366 242 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 MTCO2P6-201ENST00000463134 685 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC116337.2-201ENST00000477662 156 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC068587.2-201ENST00000478386 781 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC004924.1-201ENST00000480160 781 ntBASIC2.47□□□□□ -2.01
LIM2P55344 LARP1BP2-201ENST00000486594 519 ntBASIC2.47□□□□□ -2.01
LIM2P55344 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LIM2P55344 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.47□□□□□ -2.01
LIM2P55344 ARL4AP2-201ENST00000507378 601 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC116347.2-201ENST00000514912 523 ntBASIC2.47□□□□□ -2.01
LIM2P55344 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LIM2P55344 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 AC145350.1-201ENST00000567426 208 ntBASIC2.47□□□□□ -2.01
LIM2P55344 MIR3146-201ENST00000580367 79 ntBASIC2.47□□□□□ -2.01
LIM2P55344 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AC122133.1-201ENST00000613964 233 ntBASIC2.47□□□□□ -2.01
LIM2P55344 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.47□□□□□ -2.01
LIM2P55344 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.47□□□□□ -2.01
LIM2P55344 AC092447.7-201ENST00000422212 1621 ntBASIC2.46□□□□□ -2.02
LIM2P55344 FAM35CP-201ENST00000554755 2470 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RNU5F-6P-201ENST00000362979 116 ntBASIC2.46□□□□□ -2.02
LIM2P55344 MIR325-201ENST00000385260 98 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
LIM2P55344 MIR887-201ENST00000401258 79 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RNA5SP184-201ENST00000411071 108 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.46□□□□□ -2.02
LIM2P55344 USP9YP20-201ENST00000419224 558 ntBASIC2.46□□□□□ -2.02
LIM2P55344 NUP35P1-201ENST00000422734 947 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 MED14P1-201ENST00000430517 648 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RPL7P34-201ENST00000433316 712 ntBASIC2.46□□□□□ -2.02
LIM2P55344 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.46□□□□□ -2.02
LIM2P55344 AC118469.1-201ENST00000442943 488 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 AL139824.2-201ENST00000458731 1095 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RPL7P5-201ENST00000471472 736 ntBASIC2.46□□□□□ -2.02
LIM2P55344 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.46□□□□□ -2.02
LIM2P55344 KC877373.1-201ENST00000479066 408 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.46□□□□□ -2.02
LIM2P55344 SNORA31.3-201ENST00000516029 96 ntBASIC2.46□□□□□ -2.02
LIM2P55344 RNU6-390P-201ENST00000516259 103 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC106038.2-201ENST00000520706 568 ntBASIC2.46□□□□□ -2.02
LIM2P55344 MTND4LP18-201ENST00000526864 291 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.46□□□□□ -2.02
LIM2P55344 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LIM2P55344 AL353778.1-201ENST00000603149 408 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC136601.2-201ENST00000604356 474 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC121334.2-201ENST00000605387 271 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC092354.1-201ENST00000606057 376 ntBASIC2.46□□□□□ -2.02
LIM2P55344 BX664608.1-201ENST00000610519 487 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AC091304.6-201ENST00000619761 202 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AL356266.1-201ENST00000623311 483 ntBASIC2.46□□□□□ -2.02
LIM2P55344 FRG1KP-201ENST00000623592 341 ntBASIC2.46□□□□□ -2.02
LIM2P55344 AP003485.2-201ENST00000623636 610 ntBASIC2.46□□□□□ -2.02
LIM2P55344 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LIM2P55344 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
LIM2P55344 MTND5P29-201ENST00000458676 1807 ntBASIC2.45□□□□□ -2.02
LIM2P55344 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIM2P55344 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
LIM2P55344 SNORD62.1-201ENST00000362541 86 ntBASIC2.45□□□□□ -2.02
LIM2P55344 RNU1-100P-201ENST00000365255 165 ntBASIC2.45□□□□□ -2.02
LIM2P55344 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LIM2P55344 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.45□□□□□ -2.02
LIM2P55344 MIR888-201ENST00000401186 77 ntBASIC2.45□□□□□ -2.02
LIM2P55344 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.45□□□□□ -2.02
LIM2P55344 ELOCP17-201ENST00000414751 326 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL365496.1-201ENST00000426885 215 ntBASIC2.45□□□□□ -2.02
LIM2P55344 RPL22P17-201ENST00000438729 315 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.45□□□□□ -2.02
LIM2P55344 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.45□□□□□ -2.02
LIM2P55344 AC093392.2-201ENST00000450682 337 ntBASIC2.45□□□□□ -2.02
LIM2P55344 SNORD97-201ENST00000459187 142 ntBASIC2.45□□□□□ -2.02
LIM2P55344 RPS29P12-201ENST00000460178 152 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC091179.1-201ENST00000461606 579 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC109486.1-201ENST00000486833 374 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC026801.1-201ENST00000497178 464 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC138853.1-201ENST00000503549 823 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC098862.1-201ENST00000504991 413 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.45□□□□□ -2.02
LIM2P55344 TBCAP3-201ENST00000512475 312 ntBASIC2.45□□□□□ -2.02
LIM2P55344 RNU6-928P-201ENST00000516876 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms