Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6-711P-201ENST00000517255 106 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX1P48742 TRAV28-201ENST00000557548 323 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX1P48742 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 AC137800.2-201ENST00000574375 120 ntBASIC3.04□□□□□ -1.92
LHX1P48742 MIR3682-201ENST00000581338 84 ntBASIC3.04□□□□□ -1.92
LHX1P48742 MIR3609-201ENST00000582661 80 ntBASIC3.04□□□□□ -1.92
LHX1P48742 DPPA3P3-201ENST00000603842 430 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AL033523.1-201ENST00000605153 153 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC103710.2-201ENST00000609912 942 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC004908.3-201ENST00000610248 625 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX1P48742 AP001506.1-201ENST00000615444 211 ntBASIC3.04□□□□□ -1.92
LHX1P48742 FRG1KP-201ENST00000623592 341 ntBASIC3.04□□□□□ -1.92
LHX1P48742 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX1P48742 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LHX1P48742 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LHX1P48742 OR5J1P-201ENST00000313544 939 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU5E-1-201ENST00000362477 120 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU1-35P-201ENST00000362782 153 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU6-511P-201ENST00000363496 107 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU4-1-201ENST00000363925 141 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNY4P34-201ENST00000364779 95 ntBASIC3.03□□□□□ -1.92
LHX1P48742 DYNLT3P1-201ENST00000378574 347 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RPL23AP32-201ENST00000395315 459 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AL122016.1-201ENST00000403365 367 ntBASIC3.03□□□□□ -1.92
LHX1P48742 NDUFS5P1-201ENST00000405668 289 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU2-33P-201ENST00000410344 192 ntBASIC3.03□□□□□ -1.92
LHX1P48742 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
LHX1P48742 Z82210.1-201ENST00000440037 231 ntBASIC3.03□□□□□ -1.92
LHX1P48742 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX1P48742 USP9YP15-201ENST00000442391 422 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC025750.2-201ENST00000442609 450 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX1P48742 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX1P48742 RNU6-420P-201ENST00000458780 107 ntBASIC3.03□□□□□ -1.92
LHX1P48742 SNORD97-201ENST00000459187 142 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC091179.1-201ENST00000461606 579 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
LHX1P48742 MTCO2P29-201ENST00000465212 189 ntBASIC3.03□□□□□ -1.92
LHX1P48742 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX1P48742 KC877373.1-201ENST00000479066 408 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
LHX1P48742 NDUFB4P2-201ENST00000509515 391 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC117522.2-201ENST00000510049 657 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU6-927P-201ENST00000516199 100 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU2-10P-201ENST00000516375 211 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU6-1282P-201ENST00000516735 96 ntBASIC3.03□□□□□ -1.92
LHX1P48742 RNU2-46P-201ENST00000517038 113 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX1P48742 ATP5F1P5-201ENST00000526403 760 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AP000873.5-201ENST00000533906 236 ntBASIC3.03□□□□□ -1.92
LHX1P48742 ARL2BPP2-201ENST00000550907 489 ntBASIC3.03□□□□□ -1.92
LHX1P48742 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX1P48742 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX1P48742 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX1P48742 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX1P48742 DUXAP4-201ENST00000603046 613 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC091304.9-201ENST00000612091 226 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX1P48742 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
LHX1P48742 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LHX1P48742 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX1P48742 TEX21P-201ENST00000447107 1476 ntBASIC3.03□□□□□ -1.93
LHX1P48742 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.02□□□□□ -1.93
LHX1P48742 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
LHX1P48742 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.02□□□□□ -1.93
LHX1P48742 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX1P48742 U8.3-201ENST00000363321 132 ntBASIC3.02□□□□□ -1.93
LHX1P48742 SNORA18.3-201ENST00000384122 132 ntBASIC3.02□□□□□ -1.93
LHX1P48742 RNU6-297P-201ENST00000384636 107 ntBASIC3.02□□□□□ -1.93
LHX1P48742 MIR512-1-201ENST00000384913 84 ntBASIC3.02□□□□□ -1.93
LHX1P48742 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LHX1P48742 RNU2-36P-201ENST00000410361 191 ntBASIC3.02□□□□□ -1.93
LHX1P48742 ELOCP4-201ENST00000420090 333 ntBASIC3.02□□□□□ -1.93
LHX1P48742 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LHX1P48742 RAC1P6-201ENST00000423911 575 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AC007283.2-201ENST00000424739 197 ntBASIC3.02□□□□□ -1.93
LHX1P48742 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX1P48742 DPPA2P1-201ENST00000428060 556 ntBASIC3.02□□□□□ -1.93
LHX1P48742 OR2B8P-201ENST00000432841 938 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AC087499.2-201ENST00000432861 149 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AC105272.1-201ENST00000438604 198 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AL360221.1-201ENST00000445989 335 ntBASIC3.02□□□□□ -1.93
LHX1P48742 MTND1P27-201ENST00000451117 902 ntBASIC3.02□□□□□ -1.93
LHX1P48742 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX1P48742 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX1P48742 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX1P48742 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX1P48742 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
LHX1P48742 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX1P48742 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms