Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC092047.1-201ENST00000424997 240 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC027124.2-201ENST00000428249 105 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC006499.2-201ENST00000513470 337 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AP001189.2-201ENST00000527320 189 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AL354943.1-201ENST00000572103 781 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AP001269.3-201ENST00000588718 329 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AL592221.1-201ENST00000605266 382 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SCN4AP35499 RNU6-88P-201ENST00000606801 100 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN4AP35499 AL391987.6-201ENST00000305671 199 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SCN4AP35499 SNORD116.1-201ENST00000365628 92 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 Y_RNA.578-201ENST00000390903 88 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 RNA5SP56-201ENST00000410277 118 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 RNU6-584P-201ENST00000410350 95 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.14□□□□□ -2.07
SCN4AP35499 Z75741.2-201ENST00000417272 1167 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 HSPE1P1-201ENST00000421494 318 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 AL645638.1-201ENST00000440519 361 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 Z82190.1-201ENST00000454534 490 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 NUP58P1-201ENST00000502546 1738 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 RNU6-202P-201ENST00000515998 96 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC087441.2-201ENST00000529141 262 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC009712.1-201ENST00000564938 316 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC103987.3-201ENST00000582071 292 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 SNORD84-203ENST00000584275 78 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN4AP35499 BBIP1P1-201ENST00000602999 279 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AC009314.1-201ENST00000603871 304 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 AL512598.1-201ENST00000610158 273 ntBASIC2.14□□□□□ -2.07
SCN4AP35499 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
SCN4AP35499 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN4AP35499 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCN4AP35499 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCN4AP35499 ZNF29P-201ENST00000225587 168 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 RNU6-600P-201ENST00000362524 99 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 AL356421.1-201ENST00000403255 413 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 RPS15AP38-201ENST00000413110 372 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN4AP35499 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SCN4AP35499 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN4AP35499 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN4AP35499 AC026410.2-201ENST00000460281 156 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 RNU6-1095P-201ENST00000516148 108 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN4AP35499 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN4AP35499 AL353748.2-201ENST00000622148 471 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 AC091925.2-201ENST00000625059 256 ntBASIC2.13□□□□□ -2.07
SCN4AP35499 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN4AP35499 RNU6-1197P-201ENST00000391183 107 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 HMGB3P2-201ENST00000411913 584 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 RPL7P37-201ENST00000425095 738 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 THAP5P1-201ENST00000439089 262 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 RPL21P134-201ENST00000453468 483 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 SNORD121B-201ENST00000458838 81 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 MTND1P16-201ENST00000465177 898 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 MTCYBP17-201ENST00000503579 789 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN4AP35499 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCN4AP35499 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN4AP35499 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 SNORA31.20-201ENST00000517111 133 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN4AP35499 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 WISP1-OT1-201ENST00000602893 642 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 AC097478.2-201ENST00000610572 514 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AL079343.1-201ENST00000572358 1771 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN4AP35499 RNA5SP258-201ENST00000362750 119 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 RPL23AP47-201ENST00000408017 460 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 MTCO2P21-201ENST00000419780 677 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC007742.1-201ENST00000425789 329 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN4AP35499 ELOCP26-201ENST00000436067 329 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 GTF2IP7-202ENST00000436677 309 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms