Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 RNU6-1009P-201ENST00000390996 107 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AL356776.1-201ENST00000406574 447 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC127391.1-201ENST00000411737 98 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AL158071.1-201ENST00000430315 461 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA11P31270 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA11P31270 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 TPT1P14-201ENST00000448018 505 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXA11P31270 RPL23AP31-201ENST00000456160 467 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA11P31270 RPL23AP67-201ENST00000465341 474 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 HMGN2P13-201ENST00000476476 274 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC055855.1-201ENST00000489563 579 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 MTCO2P30-201ENST00000503662 364 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC010587.1-201ENST00000505809 469 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 KLHL2P1-201ENST00000508691 521 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 MIR2276-201ENST00000516886 89 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC090572.1-201ENST00000519251 160 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXA11P31270 AP001804.3-201ENST00000525146 880 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA11P31270 SNRPGP16-201ENST00000533275 226 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA11P31270 SUB1P2-201ENST00000556401 297 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC090615.1-201ENST00000577519 154 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC015917.1-201ENST00000579654 510 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC011471.1-201ENST00000585766 187 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC087045.1-201ENST00000605856 382 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AL133173.2-201ENST00000614270 90 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AC006504.8-201ENST00000621046 635 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 AL359697.1-201ENST00000624879 587 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 MIR3662-201ENST00000637030 95 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA11P31270 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA11P31270 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA11P31270 MTND4P23-201ENST00000447723 1363 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 Y_RNA.263-201ENST00000364659 114 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 MIR128-1-201ENST00000384921 82 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 RNA5SP229-201ENST00000410809 99 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AL356968.1-201ENST00000416622 474 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 YPEL5P1-201ENST00000419731 367 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 PSMA6P3-201ENST00000428242 164 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXA11P31270 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA11P31270 AC104308.1-201ENST00000454621 333 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 snoU109.4-201ENST00000458953 143 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 RNU6-261P-201ENST00000459506 102 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA11P31270 AC021205.2-201ENST00000480069 347 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 AC020893.1-201ENST00000502452 580 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA11P31270 SNORA31.8-201ENST00000516327 108 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 SNORA40.12-201ENST00000516329 111 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 MIR2114-201ENST00000516645 80 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC022616.3-201ENST00000523940 148 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA11P31270 MIR2682-201ENST00000580305 110 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 MIR3146-201ENST00000580367 79 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 AP001330.4-201ENST00000604350 154 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA11P31270 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA11P31270 Y_RNA.804-201ENST00000615262 101 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 AC009033.1-201ENST00000624279 431 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 CKAP2P1-201ENST00000555477 2049 ntBASIC3.56□□□□□ -1.84
HOXA11P31270 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA11P31270 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA11P31270 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA11P31270 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA11P31270 Y_RNA.72-201ENST00000362894 103 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 SNORD56.2-201ENST00000363242 71 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 Y_RNA.160-201ENST00000363677 92 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms