Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC068700.1-201ENST00000565862 3754 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 SNORD82-201ENST00000365530 70 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 RNU2-47P-201ENST00000410649 186 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A5P29400 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A5P29400 EZH2P1-201ENST00000431167 291 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A5P29400 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A5P29400 RPL31P60-201ENST00000478450 367 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 Y_RNA.675-201ENST00000516389 149 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 RPPH1-2P-201ENST00000516688 293 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC025755.1-201ENST00000521306 278 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 ARL2BPP5-201ENST00000523141 481 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.58□□□□□ -2.16
COL4A5P29400 GLYCAM1-201ENST00000546596 285 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A5P29400 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.58□□□□□ -2.16
COL4A5P29400 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.58□□□□□ -2.16
COL4A5P29400 AC068135.2-201ENST00000569293 1028 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A5P29400 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A5P29400 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AL022578.1-201ENST00000439330 1433 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 RNU2-15P-201ENST00000410692 191 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 BX682237.1-201ENST00000415016 335 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A5P29400 AL356867.1-201ENST00000429623 299 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.57□□□□□ -2.16
COL4A5P29400 MTND2P6-201ENST00000455337 1030 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC010099.1-201ENST00000455434 375 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 RPL32P14-201ENST00000463196 378 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC084024.2-201ENST00000503480 791 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
COL4A5P29400 AC010625.1-201ENST00000511296 403 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 RNU6-202P-201ENST00000515998 96 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC007115.1-201ENST00000546853 234 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 CR383656.7-201ENST00000548164 174 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AL121821.2-201ENST00000556081 394 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC068338.1-201ENST00000565567 176 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AL031176.1-201ENST00000604554 466 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.57□□□□□ -2.16
COL4A5P29400 AC027309.3-201ENST00000623419 351 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.57□□□□□ -2.16
COL4A5P29400 GDI2P1-201ENST00000429312 1336 ntBASIC1.57□□□□□ -2.16
COL4A5P29400 RNU6-461P-201ENST00000364195 107 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 RNU1-109P-201ENST00000383960 147 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL4A5P29400 RNA5SP492-201ENST00000411330 114 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 ARL2BPP3-201ENST00000421226 480 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.56□□□□□ -2.16
COL4A5P29400 AC007000.2-201ENST00000442564 487 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.56□□□□□ -2.16
COL4A5P29400 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.56□□□□□ -2.16
COL4A5P29400 RPS3AP22-201ENST00000488297 769 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 AC023424.2-201ENST00000493479 777 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A5P29400 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A5P29400 AC048346.1-201ENST00000510247 144 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A5P29400 AC113155.1-201ENST00000511141 769 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 AC008837.2-201ENST00000513076 418 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 RNA5SP436-201ENST00000516020 115 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A5P29400 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.56□□□□□ -2.16
COL4A5P29400 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
COL4A5P29400 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.56□□□□□ -2.16
COL4A5P29400 RN7SL793P-201ENST00000583259 296 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 SNORD39.3-201ENST00000584451 71 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 AC012443.1-201ENST00000605605 231 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 MIR98-201ENST00000606724 119 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 RMST_10.1-201ENST00000616309 154 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 SGO1P1-201ENST00000603525 1447 ntBASIC1.56□□□□□ -2.16
COL4A5P29400 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL4A5P29400 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.56□□□□□ -2.16
COL4A5P29400 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 RNU6-921P-201ENST00000384361 107 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 U3.29-201ENST00000391296 212 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL355615.1-201ENST00000406187 641 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL445183.3-201ENST00000414168 502 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 PNRC2P1-201ENST00000423940 420 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL022400.1-201ENST00000423946 935 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 CR848007.2-201ENST00000424918 787 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 AC005534.2-201ENST00000431047 433 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC005345.1-201ENST00000431868 217 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL591704.1-201ENST00000432574 275 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A5P29400 UBE2V1P13-201ENST00000436983 439 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL929288.2-201ENST00000446368 407 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 FABP5P5-201ENST00000515537 406 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC011260.1-201ENST00000578420 472 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 AC005498.1-201ENST00000592125 465 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL020997.3-201ENST00000602843 359 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC012669.1-201ENST00000603209 283 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC140725.3-201ENST00000616193 880 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms