Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.91□□□□□ -2.1
COL5A1P20908 AF279873.1-201ENST00000523393 313 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.91□□□□□ -2.1
COL5A1P20908 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC010546.1-201ENST00000569391 485 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC069304.2-201ENST00000605154 435 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AC011890.2-201ENST00000613393 294 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 AL603755.1-201ENST00000619504 163 ntBASIC1.91□□□□□ -2.1
COL5A1P20908 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
COL5A1P20908 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A1P20908 AC107982.1-201ENST00000507171 1300 ntBASIC1.9□□□□□ -2.1
COL5A1P20908 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.9□□□□□ -2.1
COL5A1P20908 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL5A1P20908 RNU6-839P-201ENST00000363347 108 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 RNU6-1300P-201ENST00000391046 108 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
COL5A1P20908 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
COL5A1P20908 MIR1302-8-201ENST00000408342 128 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 AL022400.1-201ENST00000423946 935 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 SEPT7P5-201ENST00000434048 306 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 RPL23AP33-201ENST00000442301 452 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 MTND5P2-201ENST00000442927 1142 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 RAB11AP1-201ENST00000442978 646 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 KATNBL1P3-201ENST00000443475 909 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.9□□□□□ -2.11
COL5A1P20908 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.9□□□□□ -2.11
COL5A1P20908 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 USP9YP10-201ENST00000454868 628 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 TPTE2P5-203ENST00000458118 728 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.9□□□□□ -2.11
COL5A1P20908 AC010301.1-201ENST00000473936 355 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 RPS26P21-201ENST00000475397 348 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL5A1P20908 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.9□□□□□ -2.11
COL5A1P20908 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.9□□□□□ -2.11
COL5A1P20908 AIG1P1-201ENST00000503376 148 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC105313.1-201ENST00000509121 353 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC010587.2-201ENST00000511727 448 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC117532.1-201ENST00000514638 323 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.9□□□□□ -2.11
COL5A1P20908 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.9□□□□□ -2.11
COL5A1P20908 PRELID2P1-201ENST00000552837 301 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC090888.1-201ENST00000561335 1141 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.9□□□□□ -2.11
COL5A1P20908 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
COL5A1P20908 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.9□□□□□ -2.11
COL5A1P20908 SNORA4-201ENST00000584302 138 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AC115085.1-201ENST00000588924 229 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 VN1R82P-201ENST00000601481 356 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AL356280.1-201ENST00000603614 379 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 HSPE1P14-201ENST00000605812 302 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 AL445523.1-201ENST00000451184 1362 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL5A1P20908 AL513185.3-201ENST00000433335 1300 ntBASIC1.9□□□□□ -2.11
COL5A1P20908 RNU6-492P-201ENST00000363035 104 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 Y_RNA.302-201ENST00000364997 102 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 RNU6-157P-201ENST00000383957 107 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 SNORA51.6-201ENST00000384151 125 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 SNORA51.11-201ENST00000384442 131 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AP000567.1-201ENST00000406413 156 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 AL139421.1-201ENST00000423010 169 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 BX119904.4-201ENST00000424402 301 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTND4P32-201ENST00000437189 1237 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTND4P6-201ENST00000438297 472 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 RPL23AP76-201ENST00000441860 458 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 HMGN3P1-201ENST00000453847 193 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC097493.1-201ENST00000463958 372 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 SETP11-201ENST00000473027 690 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RPS3AP22-201ENST00000488297 769 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC082651.2-201ENST00000496833 166 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTCO3P7-201ENST00000510008 774 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC093281.2-201ENST00000510153 597 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC109471.1-201ENST00000511631 612 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNU6-56P-201ENST00000516986 93 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms