Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC083806.3-201ENST00000614016 455 ntBASIC4.25□□□□□ -1.73
ATF4P18848 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATF4P18848 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.25□□□□□ -1.73
ATF4P18848 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATF4P18848 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
ATF4P18848 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ATF4P18848 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 AL136164.4-201ENST00000625013 2135 ntBASIC4.24□□□□□ -1.73
ATF4P18848 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATF4P18848 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ATF4P18848 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.24□□□□□ -1.73
ATF4P18848 Y_RNA.252-201ENST00000364556 101 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RNU6-1280P-201ENST00000365211 107 ntBASIC4.24□□□□□ -1.73
ATF4P18848 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATF4P18848 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATF4P18848 Y_RNA.428-201ENST00000384078 102 ntBASIC4.24□□□□□ -1.73
ATF4P18848 U3.25-201ENST00000391209 220 ntBASIC4.24□□□□□ -1.73
ATF4P18848 OR3A2-201ENST00000408891 1076 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RNU6-1245P-201ENST00000411130 106 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AC096664.2-201ENST00000411843 406 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RAB9AP3-201ENST00000412737 573 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RPL26P29-201ENST00000415623 438 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.24□□□□□ -1.73
ATF4P18848 PMCHL1-202ENST00000423102 261 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.24□□□□□ -1.73
ATF4P18848 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.24□□□□□ -1.73
ATF4P18848 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.24□□□□□ -1.73
ATF4P18848 NUTF2P3-201ENST00000448540 384 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RAB9AP1-201ENST00000449393 573 ntBASIC4.24□□□□□ -1.73
ATF4P18848 SSXP4-201ENST00000451349 245 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AL356981.1-201ENST00000454879 684 ntBASIC4.24□□□□□ -1.73
ATF4P18848 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.24□□□□□ -1.73
ATF4P18848 AC069499.1-201ENST00000489433 509 ntBASIC4.24□□□□□ -1.73
ATF4P18848 ATP5LP3-201ENST00000514223 304 ntBASIC4.24□□□□□ -1.73
ATF4P18848 RN7SKP295-201ENST00000517264 153 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AC063950.1-201ENST00000552036 308 ntBASIC4.24□□□□□ -1.73
ATF4P18848 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ATF4P18848 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.24□□□□□ -1.73
ATF4P18848 BNIP3P16-201ENST00000589779 534 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATF4P18848 AL355802.3-201ENST00000607571 545 ntBASIC4.24□□□□□ -1.73
ATF4P18848 AC005046.1-201ENST00000608515 625 ntBASIC4.24□□□□□ -1.73
ATF4P18848 OTUD4P1-201ENST00000237841 3067 ntBASIC4.24□□□□□ -1.73
ATF4P18848 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.24□□□□□ -1.73
ATF4P18848 MTND5P30-201ENST00000452896 1731 ntBASIC4.24□□□□□ -1.73
ATF4P18848 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATF4P18848 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATF4P18848 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ATF4P18848 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATF4P18848 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ATF4P18848 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.23□□□□□ -1.73
ATF4P18848 Y_RNA.5-201ENST00000362334 102 ntBASIC4.23□□□□□ -1.73
ATF4P18848 RNA5SP242-201ENST00000364171 118 ntBASIC4.23□□□□□ -1.73
ATF4P18848 RNA5SP515-201ENST00000364570 118 ntBASIC4.23□□□□□ -1.73
ATF4P18848 MIR551A-201ENST00000385042 96 ntBASIC4.23□□□□□ -1.73
ATF4P18848 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ATF4P18848 RPS29P13-201ENST00000402041 169 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.23□□□□□ -1.73
ATF4P18848 BPY2DP-201ENST00000422208 265 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.23□□□□□ -1.73
ATF4P18848 BX276092.3-201ENST00000424182 230 ntBASIC4.23□□□□□ -1.73
ATF4P18848 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.23□□□□□ -1.73
ATF4P18848 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AL162151.2-201ENST00000448875 158 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AC012308.1-201ENST00000451232 178 ntBASIC4.23□□□□□ -1.73
ATF4P18848 NUTF2P7-201ENST00000453086 375 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 RPS29P20-201ENST00000489592 171 ntBASIC4.23□□□□□ -1.73
ATF4P18848 RN7SL466P-201ENST00000497546 295 ntBASIC4.23□□□□□ -1.73
ATF4P18848 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.23□□□□□ -1.73
ATF4P18848 SNORD116.3-201ENST00000517176 78 ntBASIC4.23□□□□□ -1.73
ATF4P18848 NRBF2P4-201ENST00000520874 850 ntBASIC4.23□□□□□ -1.73
ATF4P18848 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.23□□□□□ -1.73
ATF4P18848 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATF4P18848 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.23□□□□□ -1.73
ATF4P18848 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.23□□□□□ -1.73
ATF4P18848 AC007448.1-201ENST00000582714 234 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AC069307.1-201ENST00000602820 447 ntBASIC4.23□□□□□ -1.73
ATF4P18848 MIR6826-201ENST00000617808 98 ntBASIC4.23□□□□□ -1.73
ATF4P18848 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 MIR3199-2-201ENST00000636243 86 ntBASIC4.23□□□□□ -1.73
ATF4P18848 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.23□□□□□ -1.73
ATF4P18848 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATF4P18848 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATF4P18848 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
ATF4P18848 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 AC016588.2-201ENST00000632484 3021 ntBASIC4.22□□□□□ -1.73
ATF4P18848 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms