Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MIR5690-201ENST00000583739 73 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 SNORD84-203ENST00000584275 78 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 MIR5692C1-201ENST00000585309 91 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN1P18031 AP000942.4-201ENST00000604811 241 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 RNA5SP108-201ENST00000605921 117 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 HMGN2P28-201ENST00000606102 262 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN1P18031 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 AC244517.12-201ENST00000623581 663 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN1P18031 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN1P18031 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN1P18031 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN1P18031 PRO1804-201ENST00000623780 2050 ntBASIC4.29□□□□□ -1.72
PTPN1P18031 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN1P18031 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN1P18031 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN1P18031 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN1P18031 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN1P18031 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PTPN1P18031 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN1P18031 AC090337.1-201ENST00000579651 2074 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 Y_RNA.197-201ENST00000364004 102 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 SNORA33.2-201ENST00000365413 134 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 RNU6-1074P-201ENST00000383995 104 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AL139397.2-201ENST00000404529 772 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AL445189.1-201ENST00000405722 338 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 RNU6-954P-201ENST00000411355 107 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN1P18031 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AL691449.1-201ENST00000426570 421 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AL591212.2-201ENST00000433923 257 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 TBCAP1-201ENST00000436520 327 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 Y_RNA.653-201ENST00000459091 95 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN1P18031 SNORA31.3-201ENST00000516029 96 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 RNU6-1069P-201ENST00000516612 133 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN1P18031 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN1P18031 BDH2P1-201ENST00000602288 736 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 AL355365.1-201ENST00000616480 294 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 MIR6875-201ENST00000617506 72 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
PTPN1P18031 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN1P18031 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN1P18031 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN1P18031 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN1P18031 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 RNU6-562P-201ENST00000362731 107 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 RNU6-288P-201ENST00000363690 104 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 RNU6-601P-201ENST00000384540 107 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC080125.1-201ENST00000414888 684 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 MTATP6P4-201ENST00000427725 675 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 RPL23AP69-201ENST00000431134 458 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 GPM6BP2-201ENST00000432046 144 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 RPL26P6-201ENST00000440913 438 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 GPM6BP1-201ENST00000446387 144 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AL451050.1-201ENST00000450126 415 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 NDUFS5P3-201ENST00000450668 321 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC110792.1-201ENST00000491826 472 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC079140.5-201ENST00000507882 310 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 MTCYBP40-201ENST00000509390 1135 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AC104136.1-201ENST00000512969 394 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 RANP9-201ENST00000519957 271 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN1P18031 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC005951.2-201ENST00000576282 495 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 AC015967.1-201ENST00000619893 476 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PTPN1P18031 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN1P18031 AC009812.4-201ENST00000569134 1805 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
PTPN1P18031 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN1P18031 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN1P18031 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PTPN1P18031 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTPN1P18031 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms